| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711300
Identifier: 59711300
GI number: 59711300
Start: 757337
End: 757666
Strand: Direct
Name: 59711300
Synonym: VF_0693
Alternate gene names: NA
Gene position: 757337-757666 (Clockwise)
Preceding gene: 59711299
Following gene: 59711302
Centisome position: 26.14
GC content: 39.09
Gene sequence:
>330_bases ATGAAGAGATTATTGGTATTGGCTATTTTTGGCATTCTTGGCGGTTGTTCTTCAACAGCGACACCTGATATGGGCTCGGC GAAACCAGTTCATTATGAATGTGAAGCGGGAAGAAATTTTGATATTACGTTCAATAATGATGATGCGTTGTTAACACTTC CAAAAGAGGAATACGTATTAAAGCGTGCCGTATCTGCATCAGGAATGAAGTATGTATTAAATGATGGTATGCCCGATGTT AGCTCTGCAATTGTATTTCATGGAAAAGGTGATGAAGCGATGTTAGAGCTTGGTCGAGTTGTTTTGAAAAACTGTGCTGT TTCAGAGTAA
Upstream 100 bases:
>100_bases TGGCTTGCCATTTATATAAATAAATATCTTTTTTGAAACATCTTAATGGCTCTGTTTTATCCTATAGTTACAAGGTTAGA ATTAACATAGGTTTAAAAGA
Downstream 100 bases:
>100_bases TACTAATTTAAGTAAATAGTCAGATATTTTGTAGAAAATAGATTAGATAAAAATGCCCATACATTCATTTGCATGGGCAT TATTGTATTTAGCTTAAGAG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKRLLVLAIFGILGGCSSTATPDMGSAKPVHYECEAGRNFDITFNNDDALLTLPKEEYVLKRAVSASGMKYVLNDGMPDV SSAIVFHGKGDEAMLELGRVVLKNCAVSE
Sequences:
>Translated_109_residues MKRLLVLAIFGILGGCSSTATPDMGSAKPVHYECEAGRNFDITFNNDDALLTLPKEEYVLKRAVSASGMKYVLNDGMPDV SSAIVFHGKGDEAMLELGRVVLKNCAVSE >Mature_109_residues MKRLLVLAIFGILGGCSSTATPDMGSAKPVHYECEAGRNFDITFNNDDALLTLPKEEYVLKRAVSASGMKYVLNDGMPDV SSAIVFHGKGDEAMLELGRVVLKNCAVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11711; Mature: 11711
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLVLAIFGILGGCSSTATPDMGSAKPVHYECEAGRNFDITFNNDDALLTLPKEEYVL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECHHHHHH KRAVSASGMKYVLNDGMPDVSSAIVFHGKGDEAMLELGRVVLKNCAVSE HHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLLVLAIFGILGGCSSTATPDMGSAKPVHYECEAGRNFDITFNNDDALLTLPKEEYVL CCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECHHHHHH KRAVSASGMKYVLNDGMPDVSSAIVFHGKGDEAMLELGRVVLKNCAVSE HHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA