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The map label for this gene is yhaO [H]

Identifier: 59711250

GI number: 59711250

Start: 701804

End: 703108

Strand: Direct

Name: yhaO [H]

Synonym: VF_0643

Alternate gene names: 59711250

Gene position: 701804-703108 (Clockwise)

Preceding gene: 59711246

Following gene: 172087671

Centisome position: 24.22

GC content: 37.01

Gene sequence:

>1305_bases
ATGAACACAGCTACATTGCCGAGTCATCATCATGAGAGAGATGGAATGAATGACTCTGAGTGGAAAAAAGCGACGAAATT
CGATAGTACTGATATTGGTTGGATTGTAATCAGTATTGGTATGGCCATAGGCGCAGGGATTGTTTTTTTACCTGTTCAAG
TTGGTATTATGGGACTTTGGGTTTTCCTTTTATCTTCAATTATTGGTTACCCAGCCATGTATTTGTTTCAAAAACTTTTT
ATTAACACTCTCGCAGAAGCAAAGACATGTACGGATTACCCAGGTGTTATTACTGGTTATTTAGGTAAAAACTGGGGGAT
CGCTTTAGGCGTTCTCTACTTTATAATGTTGGTTATTTGGGTGCTGGTTTACTCGCTAGCAGTTACTAATGACAGTTCAT
CATATTTGCATTCTTTTGGTGTGACTGAGGGACACTTAAACGATAACGTATTTTATGGTTTAGGCCTGATCTGTGTACTT
GCTTTTATTGGTTCTAAAGGCGAGAAATTATTATTTAAACTTTCAGGGTTTATGGCGGTAACGGTTCTGTCTTTGGTGGC
AATTATGGGACTATTGCTAGTATCTCGTTGGGATATGGCAAATATTCCAGCAATGGGATCATTTGGACCAATGCTAAAAG
ACGCGATCATTACTCTGCCTTTTACTTTAACTTCTATCTTGTTTATCCAATCATTAAGCCCTATGGTGATTTCATATCGT
TCACATGAAAAATCTATTGAGGTTGCTCGCTTTAAAGCATTGCGAGCAATGAACATTGCTTTTGGTATCTTGTTTATTGT
TGTTTTCTTCTTTGCCGTCTCTTTTACTTTTGCCATTAGCCAAGAGCAAGCGGTAGAAGCAATGAATAAAAACATTTCAG
CATTGGCGATTATTGCTCATTACTTCCCTGGGAGTTGGGCAACGATTACTGGTATCGTGATTAATATCTTCGCAGTAGTG
ACATCATTTTTTGGTGTGTTTATGGCATTCCAAGAGGCATGTCGTGGTATTGCCATGAATATACTATTAAGACGTATGGA
TGAATCTGCGATAAATAAAGAGTTGGTAAATAAACTAATTACTGTATTCATTATTTTACTTGCATGGTCTGCTGTTGCTT
TGAATGCGCCTATCTTATCTTTTACTTCGATTTGTAGCCCTGTTTTTGGTTTAGTAGGTTGTTTAATTCCAGCTTATCTT
GTGTATAAAGTACCGACACTTCATAAGTACAAAGGGGTAGCAACTAATCTAATTATTATTACTGGTATTCTGCTTTGTAT
CTCTCCAATACTTGCATTTATCTAA

Upstream 100 bases:

>100_bases
ATTAGGAGTAAATTCTTCAAAAGTTGCATTTGTACCTAGAAAGTATGATGCATTATTAATAATAAAAAATAGCGTACCCT
ACACAAAGATGGAGTTTTAT

Downstream 100 bases:

>100_bases
GATTAATTTTCTAAATAACATAAAAAAGCCCAGAGATATCCTCTCTGGGCTTTTTCTATTTTTGTTGTTATTTATTCAAG
TGAGAAGCGTGGAATTCTAA

Product: serine transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MNTATLPSHHHERDGMNDSEWKKATKFDSTDIGWIVISIGMAIGAGIVFLPVQVGIMGLWVFLLSSIIGYPAMYLFQKLF
INTLAEAKTCTDYPGVITGYLGKNWGIALGVLYFIMLVIWVLVYSLAVTNDSSSYLHSFGVTEGHLNDNVFYGLGLICVL
AFIGSKGEKLLFKLSGFMAVTVLSLVAIMGLLLVSRWDMANIPAMGSFGPMLKDAIITLPFTLTSILFIQSLSPMVISYR
SHEKSIEVARFKALRAMNIAFGILFIVVFFFAVSFTFAISQEQAVEAMNKNISALAIIAHYFPGSWATITGIVINIFAVV
TSFFGVFMAFQEACRGIAMNILLRRMDESAINKELVNKLITVFIILLAWSAVALNAPILSFTSICSPVFGLVGCLIPAYL
VYKVPTLHKYKGVATNLIIITGILLCISPILAFI

Sequences:

>Translated_434_residues
MNTATLPSHHHERDGMNDSEWKKATKFDSTDIGWIVISIGMAIGAGIVFLPVQVGIMGLWVFLLSSIIGYPAMYLFQKLF
INTLAEAKTCTDYPGVITGYLGKNWGIALGVLYFIMLVIWVLVYSLAVTNDSSSYLHSFGVTEGHLNDNVFYGLGLICVL
AFIGSKGEKLLFKLSGFMAVTVLSLVAIMGLLLVSRWDMANIPAMGSFGPMLKDAIITLPFTLTSILFIQSLSPMVISYR
SHEKSIEVARFKALRAMNIAFGILFIVVFFFAVSFTFAISQEQAVEAMNKNISALAIIAHYFPGSWATITGIVINIFAVV
TSFFGVFMAFQEACRGIAMNILLRRMDESAINKELVNKLITVFIILLAWSAVALNAPILSFTSICSPVFGLVGCLIPAYL
VYKVPTLHKYKGVATNLIIITGILLCISPILAFI
>Mature_434_residues
MNTATLPSHHHERDGMNDSEWKKATKFDSTDIGWIVISIGMAIGAGIVFLPVQVGIMGLWVFLLSSIIGYPAMYLFQKLF
INTLAEAKTCTDYPGVITGYLGKNWGIALGVLYFIMLVIWVLVYSLAVTNDSSSYLHSFGVTEGHLNDNVFYGLGLICVL
AFIGSKGEKLLFKLSGFMAVTVLSLVAIMGLLLVSRWDMANIPAMGSFGPMLKDAIITLPFTLTSILFIQSLSPMVISYR
SHEKSIEVARFKALRAMNIAFGILFIVVFFFAVSFTFAISQEQAVEAMNKNISALAIIAHYFPGSWATITGIVINIFAVV
TSFFGVFMAFQEACRGIAMNILLRRMDESAINKELVNKLITVFIILLAWSAVALNAPILSFTSICSPVFGLVGCLIPAYL
VYKVPTLHKYKGVATNLIIITGILLCISPILAFI

Specific function: Unknown

COG id: COG0814

COG function: function code E; Amino acid permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid/polyamine transporter 2 family. SdaC/TdcC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693183, Length=424, Percent_Identity=67.4528301886792, Blast_Score=595, Evalue=1e-171,
Organism=Escherichia coli, GI1789961, Length=405, Percent_Identity=43.2098765432099, Blast_Score=347, Evalue=7e-97,
Organism=Escherichia coli, GI1789160, Length=421, Percent_Identity=24.7030878859857, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1789211, Length=400, Percent_Identity=25, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1789504, Length=430, Percent_Identity=24.8837209302326, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004694 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47518; Mature: 47518

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]