| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is guaB [H]
Identifier: 59711244
GI number: 59711244
Start: 694001
End: 695464
Strand: Direct
Name: guaB [H]
Synonym: VF_0637
Alternate gene names: 59711244
Gene position: 694001-695464 (Clockwise)
Preceding gene: 59711242
Following gene: 59711245
Centisome position: 23.95
GC content: 44.19
Gene sequence:
>1464_bases ATGCTACGAATCGCAAAAGAAGCTCTAACCTTCGATGACGTTTTACTCGTCCCAGCACACTCAACAGTTCTTCCTAACAC TGCTGATCTTCGCACTCAGTTAACCAAGAACATTTCTCTGAATATTCCAATGATCTCAGCATCTATGGATACGGTAACAG AAGCGCGCCTTGCTATTGCATTAGCGCAAGAGGGTGGCATCGGTTTTATCCACAAAAACATGTCTATTGAGCAGCAAGCT GAAGAAGTTCGCCTAGTTAAAATTTTTGAAGCTGGTGTTGTTTCTGCTCCTGTCACTGTTCGTCCAGACGCAACGATTCA AGATGTTAAAGAACTAACAGAGAAACACGGCTTTGCTGGCTTCCCTGTAGTTACTGAAACTAATGAACTTGTAGGTATTA TCACAGGTCGTGATGTTCGCTTTGTAACTGATTTATCTAAGAAAGTTGACGTTGTAATGACGCCGAAATCACGTTTGGCT TCTGTTAAAGAAGGTGCAACTCGTGAAGAAGTTCAAGAGAAAATGCACGAAGCTCGTGTTGAGAAAGTACTAGTAGTGAA CGATGAGTTCCAACTAACCGGTATGATCACGGCAAAAGATTTCCATAAAGCAGAACGTAAACCAAATGCATGTAAAGACG AGCGTGGTCGTCTACGTGTAGGTGCTGCAGTAGGTGCAGGTGCAGGTAACGAAGAACGTGTTAAAGCATTAGTTGAAGCT GGTGTGGATGTTCTACTAATCGACTCTTCACACGGTCACTCTGAAGGTGTTTTAAACCGTATCCGTGAAACACGTGCTGC ATACCCAGATTTAGATATTATCGGTGGTAATGTTGCAACAGCAGCTGGTGCAAAAGCACTAATCGAAGCTGGTGTAAGCG CAGTTAAAGTGGGTATCGGCCCAGGTTCAATCTGTACAACTCGTATCGTAACAGGTGTTGGTGTTCCTCAAGTAACAGCT ATTGCAGATGCAGCATCAGCAGCGGCTGAATACGGTATTCCAGTAATCGCTGATGGCGGTATCCGTTTCTCTGGTGACAT CTGTAAAGCAATCGTAGCTGGCGCATCATGTGTGATGGTTGGTTCAATGTTTGCTGGTACAGAAGAAGCACCAGGCGAAG TGATTCTTTACCAAGGTCGTTCATACAAAGCATACCGTGGTATGGGTTCTTTAGGTGCAATGTCTCAAGGGTCTTCAGAC CGTTACTTCCAATCAGATAACGCAGCAGATAAATTGGTACCAGAAGGTATCGAAGGTCGTATCGCATATAAAGGTCGTCT AAAAGAGATCGTTCACCAACAAATGGGTGGCTTACGTTCAAGCATGGGCCTAACAGGTTCAGCAACAATTGAAGACATGC GTACTAAAGCTGAATTTGTTCGTATTTCAGGCGCAGGGATGAAAGAGTCTCACGTACATGATGTTCAAATCACGAAAGAA GCACCAAACTATCGCCTAGGCTAA
Upstream 100 bases:
>100_bases CGTATAATCCGTCTGCAATATCAAATCCAAAACACTTTATTATGCGAAACGATAAAGTGGGATTTATTCCTTTAAACACC TTTGTTGTGAGATATTGCAA
Downstream 100 bases:
>100_bases TTTTTCTTAATTTTCTTTGCAGAATCTTCCGATTTCGTTGTCAAAGGTACTCATTTACACTTGTAAACTCCGTGCCTTTT CCTAGAATTCGAATGATTCT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKELTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVKALVEA GVDVLLIDSSHGHSEGVLNRIRETRAAYPDLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQVTA IADAASAAAEYGIPVIADGGIRFSGDICKAIVAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMKESHVHDVQITKE APNYRLG
Sequences:
>Translated_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKELTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVKALVEA GVDVLLIDSSHGHSEGVLNRIRETRAAYPDLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQVTA IADAASAAAEYGIPVIADGGIRFSGDICKAIVAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMKESHVHDVQITKE APNYRLG >Mature_487_residues MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNISLNIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQA EEVRLVKIFEAGVVSAPVTVRPDATIQDVKELTEKHGFAGFPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLA SVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVKALVEA GVDVLLIDSSHGHSEGVLNRIRETRAAYPDLDIIGGNVATAAGAKALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQVTA IADAASAAAEYGIPVIADGGIRFSGDICKAIVAGASCVMVGSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSQGSSD RYFQSDNAADKLVPEGIEGRIAYKGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMKESHVHDVQITKE APNYRLG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=463, Percent_Identity=41.9006479481641, Blast_Score=340, Evalue=2e-93, Organism=Homo sapiens, GI66933016, Length=457, Percent_Identity=41.5754923413567, Blast_Score=339, Evalue=4e-93, Organism=Homo sapiens, GI34328928, Length=463, Percent_Identity=41.9006479481641, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI156616279, Length=463, Percent_Identity=41.9006479481641, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI34328930, Length=463, Percent_Identity=41.9006479481641, Blast_Score=338, Evalue=7e-93, Organism=Homo sapiens, GI217035152, Length=452, Percent_Identity=42.2566371681416, Blast_Score=332, Evalue=5e-91, Organism=Homo sapiens, GI217035148, Length=463, Percent_Identity=41.036717062635, Blast_Score=327, Evalue=2e-89, Organism=Homo sapiens, GI217035150, Length=463, Percent_Identity=38.4449244060475, Blast_Score=299, Evalue=4e-81, Organism=Homo sapiens, GI156104880, Length=247, Percent_Identity=35.2226720647773, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI50541954, Length=247, Percent_Identity=34.412955465587, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI50541952, Length=247, Percent_Identity=34.412955465587, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI50541948, Length=247, Percent_Identity=34.412955465587, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI50541956, Length=247, Percent_Identity=34.412955465587, Blast_Score=152, Evalue=7e-37, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=83.1622176591376, Blast_Score=762, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=246, Percent_Identity=32.520325203252, Blast_Score=140, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71994385, Length=500, Percent_Identity=37.2, Blast_Score=281, Evalue=7e-76, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=40.2843601895735, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17560440, Length=238, Percent_Identity=35.7142857142857, Blast_Score=151, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6323585, Length=460, Percent_Identity=39.7826086956522, Blast_Score=336, Evalue=6e-93, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=38.0952380952381, Blast_Score=331, Evalue=2e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=38.9233954451346, Blast_Score=325, Evalue=1e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=39.9408284023669, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6319353, Length=101, Percent_Identity=40.5940594059406, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=39.2561983471074, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=39.2561983471074, Blast_Score=319, Evalue=3e-87, Organism=Drosophila melanogaster, GI28571163, Length=442, Percent_Identity=39.8190045248869, Blast_Score=286, Evalue=2e-77,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51665; Mature: 51665
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNISLNIPMISASMDTVTEARLAIA CCEEHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEECEEEECCHHHHHHHHEEEE LAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVVSAPVTVRPDATIQDVKELTEKHGFAG EECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC FPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLASVKEGATREEVQEKMHEARV CCEEECCCCEEEEEECCCEEEEEHHCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH EKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVKALVEA CEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLNRIRETRAAYPDLDIIGGNVATAAGAKALIEAGVSAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQVTAIADAASAAAEYGIPVIADGGIRFSGDICKAIVAGASCVMV CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEH GSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE IAYKGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMKESHVHDVQITKE EEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEEECC APNYRLG CCCCCCC >Mature Secondary Structure MLRIAKEALTFDDVLLVPAHSTVLPNTADLRTQLTKNISLNIPMISASMDTVTEARLAIA CCEEHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCEEEECEEEECCHHHHHHHHEEEE LAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVVSAPVTVRPDATIQDVKELTEKHGFAG EECCCCEEEEECCCCHHHHHHHHEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHCCCCC FPVVTETNELVGIITGRDVRFVTDLSKKVDVVMTPKSRLASVKEGATREEVQEKMHEARV CCEEECCCCEEEEEECCCEEEEEHHCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH EKVLVVNDEFQLTGMITAKDFHKAERKPNACKDERGRLRVGAAVGAGAGNEERVKALVEA CEEEEECCCEEEEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHC GVDVLLIDSSHGHSEGVLNRIRETRAAYPDLDIIGGNVATAAGAKALIEAGVSAVKVGIG CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECC PGSICTTRIVTGVGVPQVTAIADAASAAAEYGIPVIADGGIRFSGDICKAIVAGASCVMV CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEH GSMFAGTEEAPGEVILYQGRSYKAYRGMGSLGAMSQGSSDRYFQSDNAADKLVPEGIEGR HHHHCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCE IAYKGRLKEIVHQQMGGLRSSMGLTGSATIEDMRTKAEFVRISGAGMKESHVHDVQITKE EEEHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHEEEEECCCCCCCCCEEEEEECC APNYRLG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]