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The map label for this gene is yjgF [C]

Identifier: 59711011

GI number: 59711011

Start: 433218

End: 433607

Strand: Reverse

Name: yjgF [C]

Synonym: VF_0404

Alternate gene names: 59711011

Gene position: 433607-433218 (Counterclockwise)

Preceding gene: 59711012

Following gene: 59711000

Centisome position: 14.96

GC content: 41.28

Gene sequence:

>390_bases
ATGACTAAAGTTCTTCATACAGATAATGCACCAGCAGCTATTGGCCCATACATTCAAGGTGTTGACCTTGGTAATATGGT
ACTGACTTCAGGCCAAATCCCTGTAAACCCTGCTACAGGTGAAGTTTCTGACGATATCGCTGAGCAAGCACGCCAATCAC
TAGAGAACGTAAAAGCCGTTGTTGAAGCTTCTGGCCTAACTGTATCTGACATTGTAAAAATGACAGTTTTCGTAAAAGAT
CTTAATGACTTTGGCACAGTAAACGAAGTATATGGTAACTTCTTCGACGAACACAAAGTTGCAAACTACCCTGCTCGCTC
TTGTGTTGAAGTAGCTCGTCTACCAAAAGATGTTGGTATCGAAATCGAAGCTATTGCAGTTCGTAAATAA

Upstream 100 bases:

>100_bases
GCTGTTTTCTTACTGTTATTTGTTTTATATTGAACAATCGTAATGCTTCTAAGGCCTATTGCTCCTTAGACTTACTTTAT
TTCAAAAAGGAATCATAACA

Downstream 100 bases:

>100_bases
TCGAACACTAAATTAAAACGAAATAAGGCAGAATCTTTTCTGCCTTATTTTTATCTAATAAAAGAATATCGACTTAGTTC
ACTTGCTGTAGGTGAGTAAG

Product: ketoacid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MTKVLHTDNAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVSDDIAEQARQSLENVKAVVEASGLTVSDIVKMTVFVKD
LNDFGTVNEVYGNFFDEHKVANYPARSCVEVARLPKDVGIEIEAIAVRK

Sequences:

>Translated_129_residues
MTKVLHTDNAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVSDDIAEQARQSLENVKAVVEASGLTVSDIVKMTVFVKD
LNDFGTVNEVYGNFFDEHKVANYPARSCVEVARLPKDVGIEIEAIAVRK
>Mature_128_residues
TKVLHTDNAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVSDDIAEQARQSLENVKAVVEASGLTVSDIVKMTVFVKDL
NDFGTVNEVYGNFFDEHKVANYPARSCVEVARLPKDVGIEIEAIAVRK

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=129, Percent_Identity=43.4108527131783, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI87082396, Length=129, Percent_Identity=75.968992248062, Blast_Score=202, Evalue=6e-54,
Organism=Escherichia coli, GI87082213, Length=128, Percent_Identity=70.3125, Blast_Score=192, Evalue=4e-51,
Organism=Escherichia coli, GI1787245, Length=116, Percent_Identity=29.3103448275862, Blast_Score=66, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71982075, Length=125, Percent_Identity=42.4, Blast_Score=112, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI25148896, Length=125, Percent_Identity=42.4, Blast_Score=112, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71982068, Length=125, Percent_Identity=42.4, Blast_Score=112, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6322138, Length=123, Percent_Identity=43.0894308943089, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320899, Length=107, Percent_Identity=43.9252336448598, Blast_Score=96, Evalue=1e-21,
Organism=Drosophila melanogaster, GI19921376, Length=126, Percent_Identity=43.6507936507937, Blast_Score=99, Evalue=9e-22,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13844; Mature: 13713

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVLHTDNAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVSDDIAEQARQSLENVKAV
CCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VEASGLTVSDIVKMTVFVKDLNDFGTVNEVYGNFFDEHKVANYPARSCVEVARLPKDVGI
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
EIEAIAVRK
EEEEEEECC
>Mature Secondary Structure 
TKVLHTDNAPAAIGPYIQGVDLGNMVLTSGQIPVNPATGEVSDDIAEQARQSLENVKAV
CCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
VEASGLTVSDIVKMTVFVKDLNDFGTVNEVYGNFFDEHKVANYPARSCVEVARLPKDVGI
HHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCC
EIEAIAVRK
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]