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The map label for this gene is mshI

Identifier: 59710963

GI number: 59710963

Start: 388101

End: 389564

Strand: Direct

Name: mshI

Synonym: VF_0356

Alternate gene names: NA

Gene position: 388101-389564 (Clockwise)

Preceding gene: 59710962

Following gene: 59710964

Centisome position: 13.39

GC content: 36.27

Gene sequence:

>1464_bases
ATGAAAATTATGGATGCACTGAAAAAGCTGAAACTATCTCGTTCAGTAAAAACCACCACGTCAATTGTGATCTTACAAGG
TGGTGTTTATATTGCGAAAAGTGATGGATTTGATGAGCTTCAAGAGCATTATTTTACGCCAATAAATCAACCTCAATCAT
GGAAAGATGTGATTGTTGAAGCGTGCGAGAAAGCTGGAGTAACCAATTCTAGTGCCAGTGTTATTTTAGGTTCTCACCTG
TATCAATCCTTTCAAATAGATAATCCTAATTTACCAAAAGAAGAGTTGACTGGAGCGTTACCTTTCTTAGTGAAAGATCT
TATTACCGATCGTATTGCTGATATTGTTGCTGATGGTATCGAAACGATAAATGGCAAGCTTCAGGTTTATATATCTCAAG
TTACTACGCTTCATACATTGATTGACTCATTAAGTCCTCTTTCGATTCAAATAAATAATGTGACGCCAGATGAACTACTT
TGGGCTTACTCTCAGCCTGAAGACGGTAGCTTTATGTTATTAAATCATAGCCAGTCTGCTGATTTTAAATTATTGGCGTT
TAATAATGGTCACTTACATTTAAACCGCTCTTTACGTGGTATTACTGCACCATTAACTGGGGATCAAGCTAATAGTTTTC
AAATGGACAGCTTGGCATTAGAGTTACAGCGCTCACTTGACTACTTAAGCTCTCAATTACATGGCGTAAGCATTAATAAT
TTGTTTTTCCGTTGTGATGATGAAGACGATGCCCTTCTTGCTCTTGAGTTGCAAAATCGATTAGGCGTAAAGGTTGCTTC
ATTACTTGTTGATGAACCAAGAGCTTTTCGTTCTGGAGAAGTCCTGGCGTGGTTAGCTTTATTTAATACGCCAAGTATCA
ACTTGTTTCATGAAACGTTAAAACTTAAAACAGATTATTTTACATTACAAAATGTGATGATCAGTTGGGGGGTAGGGTTA
GCGTTAAGTATTGCTGTTGTTGGGTATTACCAATGGCAAATTTACAATTTAGAGACAACGATAAACGCAAATTCATTAAA
AGAAAGTAATTATAAACAAGAATTAGCTACGTTAAATAAGAAATTAGAGAGTCACAAACCTTCGGCAGCTAAGTTAGCTG
CGATTAAGCGATTAAATGATGATATTCAATCGAAAAAAGCTTCATTAAAGGTGATTGATAATTTTGACGAGGGAATGCAA
GTAGGTTACTCGGGAGTGATGAGTAGCTTGACTCAATTAGGTAAAGGAAACATCTCACTTAATAAAATCTATATCTCTGG
CGATAAGGTTAACTTTGCTGGTTATGCTCGTACGCCTGATGTTATTCCTCGCTGGGTTCAGAGCTTTGATAGTGAATTGC
ATTTAGTTGGACGTACTTTTGATCAACTTGAAATAAAAACAGACGATAAAGGTCTGGTGTCATTTATTTTAAATACTAAG
GCATCAGAGGGTAATCATGAGTAA

Upstream 100 bases:

>100_bases
TAACGGTCGTATCCTAAAAGAATAGAATGTTGTATGATTGCGCGTCACTTGTGTTCTTTATGAGAACGTTGTAAGTAAAG
TAAGAAAAGTCGAGCAATCA

Downstream 100 bases:

>100_bases
TTGGAATCAAGTAAAAGAGAAATTTGGTGCTTTGTCGCAAAGAGAAAAAGTACTCATTACATTGGTTGGCTGGGTTGCGG
TAATCTTCATTTCATTAAGT

Product: MSHA biogenesis protein MshI

Products: NA

Alternate protein names: Biogenesis Protein MshI; Mannose-Sensitive Agglutinin; Msha Biogenesis Protein Mshi; Mannose-Sensitive Agglutininwith Frame Shift; MSHA Biogenesis; Type IV Pilus Mannose-Sensitive Hemagglutinin D

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MKIMDALKKLKLSRSVKTTTSIVILQGGVYIAKSDGFDELQEHYFTPINQPQSWKDVIVEACEKAGVTNSSASVILGSHL
YQSFQIDNPNLPKEELTGALPFLVKDLITDRIADIVADGIETINGKLQVYISQVTTLHTLIDSLSPLSIQINNVTPDELL
WAYSQPEDGSFMLLNHSQSADFKLLAFNNGHLHLNRSLRGITAPLTGDQANSFQMDSLALELQRSLDYLSSQLHGVSINN
LFFRCDDEDDALLALELQNRLGVKVASLLVDEPRAFRSGEVLAWLALFNTPSINLFHETLKLKTDYFTLQNVMISWGVGL
ALSIAVVGYYQWQIYNLETTINANSLKESNYKQELATLNKKLESHKPSAAKLAAIKRLNDDIQSKKASLKVIDNFDEGMQ
VGYSGVMSSLTQLGKGNISLNKIYISGDKVNFAGYARTPDVIPRWVQSFDSELHLVGRTFDQLEIKTDDKGLVSFILNTK
ASEGNHE

Sequences:

>Translated_487_residues
MKIMDALKKLKLSRSVKTTTSIVILQGGVYIAKSDGFDELQEHYFTPINQPQSWKDVIVEACEKAGVTNSSASVILGSHL
YQSFQIDNPNLPKEELTGALPFLVKDLITDRIADIVADGIETINGKLQVYISQVTTLHTLIDSLSPLSIQINNVTPDELL
WAYSQPEDGSFMLLNHSQSADFKLLAFNNGHLHLNRSLRGITAPLTGDQANSFQMDSLALELQRSLDYLSSQLHGVSINN
LFFRCDDEDDALLALELQNRLGVKVASLLVDEPRAFRSGEVLAWLALFNTPSINLFHETLKLKTDYFTLQNVMISWGVGL
ALSIAVVGYYQWQIYNLETTINANSLKESNYKQELATLNKKLESHKPSAAKLAAIKRLNDDIQSKKASLKVIDNFDEGMQ
VGYSGVMSSLTQLGKGNISLNKIYISGDKVNFAGYARTPDVIPRWVQSFDSELHLVGRTFDQLEIKTDDKGLVSFILNTK
ASEGNHE
>Mature_487_residues
MKIMDALKKLKLSRSVKTTTSIVILQGGVYIAKSDGFDELQEHYFTPINQPQSWKDVIVEACEKAGVTNSSASVILGSHL
YQSFQIDNPNLPKEELTGALPFLVKDLITDRIADIVADGIETINGKLQVYISQVTTLHTLIDSLSPLSIQINNVTPDELL
WAYSQPEDGSFMLLNHSQSADFKLLAFNNGHLHLNRSLRGITAPLTGDQANSFQMDSLALELQRSLDYLSSQLHGVSINN
LFFRCDDEDDALLALELQNRLGVKVASLLVDEPRAFRSGEVLAWLALFNTPSINLFHETLKLKTDYFTLQNVMISWGVGL
ALSIAVVGYYQWQIYNLETTINANSLKESNYKQELATLNKKLESHKPSAAKLAAIKRLNDDIQSKKASLKVIDNFDEGMQ
VGYSGVMSSLTQLGKGNISLNKIYISGDKVNFAGYARTPDVIPRWVQSFDSELHLVGRTFDQLEIKTDDKGLVSFILNTK
ASEGNHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54118; Mature: 54118

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIMDALKKLKLSRSVKTTTSIVILQGGVYIAKSDGFDELQEHYFTPINQPQSWKDVIVE
CCHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHH
ACEKAGVTNSSASVILGSHLYQSFQIDNPNLPKEELTGALPFLVKDLITDRIADIVADGI
HHHHCCCCCCCCCEEEEHHHHHHEECCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ETINGKLQVYISQVTTLHTLIDSLSPLSIQINNVTPDELLWAYSQPEDGSFMLLNHSQSA
HHCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCHHHHEEEECCCCCCCEEEEECCCCC
DFKLLAFNNGHLHLNRSLRGITAPLTGDQANSFQMDSLALELQRSLDYLSSQLHGVSINN
CEEEEEEECCEEEEECCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEC
LFFRCDDEDDALLALELQNRLGVKVASLLVDEPRAFRSGEVLAWLALFNTPSINLFHETL
EEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
KLKTDYFTLQNVMISWGVGLALSIAVVGYYQWQIYNLETTINANSLKESNYKQELATLNK
HHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHH
KLESHKPSAAKLAAIKRLNDDIQSKKASLKVIDNFDEGMQVGYSGVMSSLTQLGKGNISL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
NKIYISGDKVNFAGYARTPDVIPRWVQSFDSELHLVGRTFDQLEIKTDDKGLVSFILNTK
EEEEEECCEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCHHHHHEECCC
ASEGNHE
CCCCCCC
>Mature Secondary Structure
MKIMDALKKLKLSRSVKTTTSIVILQGGVYIAKSDGFDELQEHYFTPINQPQSWKDVIVE
CCHHHHHHHHHHHCCCCCEEEEEEEECCEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHH
ACEKAGVTNSSASVILGSHLYQSFQIDNPNLPKEELTGALPFLVKDLITDRIADIVADGI
HHHHCCCCCCCCCEEEEHHHHHHEECCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
ETINGKLQVYISQVTTLHTLIDSLSPLSIQINNVTPDELLWAYSQPEDGSFMLLNHSQSA
HHCCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCHHHHEEEECCCCCCCEEEEECCCCC
DFKLLAFNNGHLHLNRSLRGITAPLTGDQANSFQMDSLALELQRSLDYLSSQLHGVSINN
CEEEEEEECCEEEEECCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEC
LFFRCDDEDDALLALELQNRLGVKVASLLVDEPRAFRSGEVLAWLALFNTPSINLFHETL
EEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
KLKTDYFTLQNVMISWGVGLALSIAVVGYYQWQIYNLETTINANSLKESNYKQELATLNK
HHHHHHHHHHHHHHHHCHHHHHHHHHEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHH
KLESHKPSAAKLAAIKRLNDDIQSKKASLKVIDNFDEGMQVGYSGVMSSLTQLGKGNISL
HHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
NKIYISGDKVNFAGYARTPDVIPRWVQSFDSELHLVGRTFDQLEIKTDDKGLVSFILNTK
EEEEEECCEEEECCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEECCCCHHHHHEECCC
ASEGNHE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA