| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710950
Identifier: 59710950
GI number: 59710950
Start: 372377
End: 372781
Strand: Reverse
Name: 59710950
Synonym: VF_0343
Alternate gene names: NA
Gene position: 372781-372377 (Counterclockwise)
Preceding gene: 59710951
Following gene: 59710949
Centisome position: 12.87
GC content: 34.07
Gene sequence:
>405_bases GTGGGCAATCATAGACAACAAAAGTTACTTGAGCATTTCTATTCTTCTTTAGATGAAAATGTCATTGATGAGCTCTCTGA AGAACAAAAAGAATCCATTGAACGCGCGATCATTGCGACAGGGTTAGGTTCAAATAATCGTGTTGATATTAGAAAAAGTA TTTCTGTTTTTAATAAGCGCTATTTTTTTGTTTTCCTTCTGGGGCGAGATTATCGACAACAGTTACGTAAAGAGTCTCCT TTTGCATTATTAATACTTACCTTTCTTATATCCATCGGCATTTTTTGTATATTAGGACTGGCCATTTTTGCTTTGTATCT AATCAAATCAGCCTTAGGTATTGATATTTTCCATAACTTTTCTTTTGGTGTTTGGGATTGGTTTAAAGAGTTAATGCAGC ACTAG
Upstream 100 bases:
>100_bases AGCATCAATTATGCATCCTATCTTGAATATTACGACTGGGAAAAAATAGCGACTCAAACCATGGCGGTTTACCAAAGAGC ATTAACTAAGAAGGTATTAA
Downstream 100 bases:
>100_bases TTTTACATGTGGTTTTCATGCTTATTAAAGAGAAAATCACATTAATAATGATACGGAGCTCTATTTTTGATGAAAGCACT TCATTTCATACACCTAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGNHRQQKLLEHFYSSLDENVIDELSEEQKESIERAIIATGLGSNNRVDIRKSISVFNKRYFFVFLLGRDYRQQLRKESP FALLILTFLISIGIFCILGLAIFALYLIKSALGIDIFHNFSFGVWDWFKELMQH
Sequences:
>Translated_134_residues MGNHRQQKLLEHFYSSLDENVIDELSEEQKESIERAIIATGLGSNNRVDIRKSISVFNKRYFFVFLLGRDYRQQLRKESP FALLILTFLISIGIFCILGLAIFALYLIKSALGIDIFHNFSFGVWDWFKELMQH >Mature_133_residues GNHRQQKLLEHFYSSLDENVIDELSEEQKESIERAIIATGLGSNNRVDIRKSISVFNKRYFFVFLLGRDYRQQLRKESPF ALLILTFLISIGIFCILGLAIFALYLIKSALGIDIFHNFSFGVWDWFKELMQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15693; Mature: 15562
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNHRQQKLLEHFYSSLDENVIDELSEEQKESIERAIIATGLGSNNRVDIRKSISVFNKR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH YFFVFLLGRDYRQQLRKESPFALLILTFLISIGIFCILGLAIFALYLIKSALGIDIFHNF HHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SFGVWDWFKELMQH CCCHHHHHHHHHCC >Mature Secondary Structure GNHRQQKLLEHFYSSLDENVIDELSEEQKESIERAIIATGLGSNNRVDIRKSISVFNKR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH YFFVFLLGRDYRQQLRKESPFALLILTFLISIGIFCILGLAIFALYLIKSALGIDIFHNF HHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SFGVWDWFKELMQH CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA