| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pgi [H]
Identifier: 59710911
GI number: 59710911
Start: 313389
End: 315041
Strand: Direct
Name: pgi [H]
Synonym: VF_0304
Alternate gene names: 59710911
Gene position: 313389-315041 (Clockwise)
Preceding gene: 59710910
Following gene: 59710914
Centisome position: 10.82
GC content: 40.35
Gene sequence:
>1653_bases ATGTTAAAAAACATCAACCCAACAGAAACTCAAGCTTGGGCAGACTTAACAGCGCACTTTGAAACAGCACAAGATTTTAA TTTATCAGATTTATTTGCTGCTGATGCACAACGTTTCGATAAGTTTTCAGCAACGTTTGGCCAAGATATTTTAGTCGATT TTTCTAAAAACTTAATTACTGAAGAAACAATGAAGAAGTTGTTTGCACTTGCTGAGCAAACAGAATTATCTTCAGCAATT ACAGCGATGTTCAGTGGTGAAAAAATCAATAAAACTGAAGGTCGTTCAGTGCTTCATACTGCACTTCGTAACCGTAGCAA CACACCAGTGATGGTTGATGGTGAAGATGTAATGCCTGCAGTAAATGCAGTATTAGAAAAAATGAAAGGCTTCACAGAGC GTCTAATTTCTGGTGAGTGGAAAGGTTACACAGGCAAAGAAATTACGGATATCGTAAATATCGGTATCGGCGGTTCAGAC CTTGGTCCATACATGGTATCTGAAGCTCTAGCACCATACAAAACGCGTCTAAATATGCACTTTGTTTCTAACGTAGATGG TACGCACATTGTTGAAACACTGAAGCCGCTAAACCCAGAGACGACATTATTCTTAATCGCCTCTAAGACGTTCACAACTC AAGAAACAATGACGAACGCACACAGCGCTCGTGATTGGTTCCTTGCTGAAGCTGGTGATCAAGCACACGTTGCTAAACAC TTCGCGGCACTATCAACAAACGCACAGTCTGTATCTGAGTTTGGTATTGATACTGACAATATGTTTGAATTCTGGGATTG GGTTGGTGGTCGTTACTCACTATGGTCTGCTATCGGTCTTTCTATCGCATTAGCGGTTGGTTTTGATAACTTTATTGAGT TGTTAGAAGGTGCTCATGAAGTAGATAAGCACTTCGCTGAAACCGATCTTGAAAATAACGTACCTGTTATCTTAGCGCTA ATTGGCTTATGGTATAACAACTTCCACGGTGCTGAATCTGAATCTATTCTTCCATACGACCAATACTTACACCGTTTTGC TGCGTACTTCCAACAAGGCAACATGGAGTCAAATGGTAAGTGTGTTGATCGTAATGGTAACCCTGTTGATTACCAAACAG GTCCAATTATTTGGGGTGAACCTGGTACAAATGGCCAACATGCGTTCTACCAATTAATTCACCAAGGTACAAAACTTATC CCTTGTGATTTTATTGCTCCAGCAATCAGCCACAACCAAGTAGGCGATCATCATCAAAAACTGATGTCTAACTTCTTCGC ACAAACTGAAGCGTTAGCGTTTGGTAAAACAGAAGAGACAGTGAAAGCAGAATTTGCTGCTGCAGGTAAAACAGAAGCTG AAGTCGCTGAGCTTGTACCATTTAAAGTATTTGAAGGTAACCGTCCAACGAACTCAATTCTTGTTAAACAAGTTACTCCT AAAACACTAGGTAACCTTATCGCAATGTACGAACACAAAATTTTCGTTCAAGGTGTGATTTGGAATATTTTCAGCTTCGA CCAATGGGGCGTAGAGCTTGGTAAGCAACTGGCTAACCAAATTCTTCCTGAGTTAGCTGATGATAAAGCGGTAACGTCTC ACGACAGTTCAACAAACGGTTTAATTAACGCATTTAAAGCGTTTCAAGCTTAA
Upstream 100 bases:
>100_bases TCATAATAAATAAAGTTCACCAATTTTTAGATTCGTATAAACGGGGAGTTCTTAGCTACGACTTGGAACTTACAAGCATA TTACACAGGATATTTTTACC
Downstream 100 bases:
>100_bases TCATTAGCTTATTGCGTTAACTAATTAAAAAGAGCTGACTTCGGTCGGCTCTTTTTTTAGATATTACAGGCAATAAAAAA GGTTGATACCTAAATATCAA
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MLKNINPTETQAWADLTAHFETAQDFNLSDLFAADAQRFDKFSATFGQDILVDFSKNLITEETMKKLFALAEQTELSSAI TAMFSGEKINKTEGRSVLHTALRNRSNTPVMVDGEDVMPAVNAVLEKMKGFTERLISGEWKGYTGKEITDIVNIGIGGSD LGPYMVSEALAPYKTRLNMHFVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHSARDWFLAEAGDQAHVAKH FAALSTNAQSVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIALAVGFDNFIELLEGAHEVDKHFAETDLENNVPVILAL IGLWYNNFHGAESESILPYDQYLHRFAAYFQQGNMESNGKCVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLI PCDFIAPAISHNQVGDHHQKLMSNFFAQTEALAFGKTEETVKAEFAAAGKTEAEVAELVPFKVFEGNRPTNSILVKQVTP KTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPELADDKAVTSHDSSTNGLINAFKAFQA
Sequences:
>Translated_550_residues MLKNINPTETQAWADLTAHFETAQDFNLSDLFAADAQRFDKFSATFGQDILVDFSKNLITEETMKKLFALAEQTELSSAI TAMFSGEKINKTEGRSVLHTALRNRSNTPVMVDGEDVMPAVNAVLEKMKGFTERLISGEWKGYTGKEITDIVNIGIGGSD LGPYMVSEALAPYKTRLNMHFVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHSARDWFLAEAGDQAHVAKH FAALSTNAQSVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIALAVGFDNFIELLEGAHEVDKHFAETDLENNVPVILAL IGLWYNNFHGAESESILPYDQYLHRFAAYFQQGNMESNGKCVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLI PCDFIAPAISHNQVGDHHQKLMSNFFAQTEALAFGKTEETVKAEFAAAGKTEAEVAELVPFKVFEGNRPTNSILVKQVTP KTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPELADDKAVTSHDSSTNGLINAFKAFQA >Mature_550_residues MLKNINPTETQAWADLTAHFETAQDFNLSDLFAADAQRFDKFSATFGQDILVDFSKNLITEETMKKLFALAEQTELSSAI TAMFSGEKINKTEGRSVLHTALRNRSNTPVMVDGEDVMPAVNAVLEKMKGFTERLISGEWKGYTGKEITDIVNIGIGGSD LGPYMVSEALAPYKTRLNMHFVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHSARDWFLAEAGDQAHVAKH FAALSTNAQSVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIALAVGFDNFIELLEGAHEVDKHFAETDLENNVPVILAL IGLWYNNFHGAESESILPYDQYLHRFAAYFQQGNMESNGKCVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLI PCDFIAPAISHNQVGDHHQKLMSNFFAQTEALAFGKTEETVKAEFAAAGKTEAEVAELVPFKVFEGNRPTNSILVKQVTP KTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPELADDKAVTSHDSSTNGLINAFKAFQA
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=532, Percent_Identity=64.4736842105263, Blast_Score=717, Evalue=0.0, Organism=Homo sapiens, GI296080693, Length=532, Percent_Identity=60.3383458646617, Blast_Score=654, Evalue=0.0, Organism=Escherichia coli, GI1790457, Length=549, Percent_Identity=75.7741347905282, Blast_Score=897, Evalue=0.0, Organism=Caenorhabditis elegans, GI71996708, Length=550, Percent_Identity=62.5454545454545, Blast_Score=707, Evalue=0.0, Organism=Caenorhabditis elegans, GI71996703, Length=545, Percent_Identity=62.9357798165138, Blast_Score=706, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6319673, Length=547, Percent_Identity=58.3180987202925, Blast_Score=643, Evalue=0.0, Organism=Drosophila melanogaster, GI24651916, Length=543, Percent_Identity=62.7992633517495, Blast_Score=702, Evalue=0.0, Organism=Drosophila melanogaster, GI24651914, Length=543, Percent_Identity=62.7992633517495, Blast_Score=702, Evalue=0.0, Organism=Drosophila melanogaster, GI17737445, Length=543, Percent_Identity=62.7992633517495, Blast_Score=702, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 60931; Mature: 60931
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNINPTETQAWADLTAHFETAQDFNLSDLFAADAQRFDKFSATFGQDILVDFSKNLIT CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EETMKKLFALAEQTELSSAITAMFSGEKINKTEGRSVLHTALRNRSNTPVMVDGEDVMPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHH VNAVLEKMKGFTERLISGEWKGYTGKEITDIVNIGIGGSDLGPYMVSEALAPYKTRLNMH HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHEEEE FVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHSARDWFLAEAGDQAHVAKH EECCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCHHHHHHH FAALSTNAQSVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIALAVGFDNFIELLEGAHE HHHHCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH VDKHFAETDLENNVPVILALIGLWYNNFHGAESESILPYDQYLHRFAAYFQQGNMESNGK HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCE CVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAISHNQVGDHHQK EECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHH LMSNFFAQTEALAFGKTEETVKAEFAAAGKTEAEVAELVPFKVFEGNRPTNSILVKQVTP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCEEEEECCH KTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPELADDKAVTSHDSSTNG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH LINAFKAFQA HHHHHHHHCC >Mature Secondary Structure MLKNINPTETQAWADLTAHFETAQDFNLSDLFAADAQRFDKFSATFGQDILVDFSKNLIT CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EETMKKLFALAEQTELSSAITAMFSGEKINKTEGRSVLHTALRNRSNTPVMVDGEDVMPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHH VNAVLEKMKGFTERLISGEWKGYTGKEITDIVNIGIGGSDLGPYMVSEALAPYKTRLNMH HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHEEEE FVSNVDGTHIVETLKPLNPETTLFLIASKTFTTQETMTNAHSARDWFLAEAGDQAHVAKH EECCCCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHEECCCCHHHHHHH FAALSTNAQSVSEFGIDTDNMFEFWDWVGGRYSLWSAIGLSIALAVGFDNFIELLEGAHE HHHHCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH VDKHFAETDLENNVPVILALIGLWYNNFHGAESESILPYDQYLHRFAAYFQQGNMESNGK HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCE CVDRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAISHNQVGDHHQK EECCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHH LMSNFFAQTEALAFGKTEETVKAEFAAAGKTEAEVAELVPFKVFEGNRPTNSILVKQVTP HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCEEEEECCH KTLGNLIAMYEHKIFVQGVIWNIFSFDQWGVELGKQLANQILPELADDKAVTSHDSSTNG HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH LINAFKAFQA HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA