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The map label for this gene is uspF [H]

Identifier: 59710879

GI number: 59710879

Start: 277693

End: 278130

Strand: Reverse

Name: uspF [H]

Synonym: VF_0272

Alternate gene names: 59710879

Gene position: 278130-277693 (Counterclockwise)

Preceding gene: 59710880

Following gene: 59710871

Centisome position: 9.6

GC content: 38.58

Gene sequence:

>438_bases
ATGTATAAACAGATCTTGGTTCCAGTAGATTTAAACGAAAAAGGGTTTGCAGATAAAGCCGTTGAATTAGCGGTTTGGCA
TGCAAAACAATCAAATGCAGAGCTGCATCTTTTAAATGTATTGCCGGGGATTCATATGTCTATGGTCTCTACATACTTTC
CTAAAGATGCGGCAAAGCAAATGAAAGCTGATGTATCCGAACAATTAAACAAGTTTGCTGCGAAGTTTGTTGATGAGGAA
GTCGTATATAGAGTTCATGTGTCAGAAGGAAAACCTTATGTCACAATTCTTGATTACGCAGAACGCTTAGGTGCTGATCT
TATTGTTATGCCAAGTCACAAACGCTCAAAAATTGATAAGGTGATGCTTGGTTCGGTGGCAAGTAAAGTTGTTGAAAACT
CACCAATCAATGTCATGGTTGTAAAGCCACAAGGCTAA

Upstream 100 bases:

>100_bases
AGGCTTAAATCAACGTCGCCGAGCAAAAAAGGATAACTTAGCGGCATAATTGAATGGAATCTATGGGGAGTATCATCTCC
CCAAATTAGGTAATAAAAAT

Downstream 100 bases:

>100_bases
CCATAATGAAAAGATTCAGTTCGAGACATTCATCTCGAACTGATTTTTTTATTAAGATGATTTCAATGTTTTATAATCTG
GTAGCTTTCTTGTTGGATCA

Product: universal stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MYKQILVPVDLNEKGFADKAVELAVWHAKQSNAELHLLNVLPGIHMSMVSTYFPKDAAKQMKADVSEQLNKFAAKFVDEE
VVYRVHVSEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG

Sequences:

>Translated_145_residues
MYKQILVPVDLNEKGFADKAVELAVWHAKQSNAELHLLNVLPGIHMSMVSTYFPKDAAKQMKADVSEQLNKFAAKFVDEE
VVYRVHVSEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG
>Mature_145_residues
MYKQILVPVDLNEKGFADKAVELAVWHAKQSNAELHLLNVLPGIHMSMVSTYFPKDAAKQMKADVSEQLNKFAAKFVDEE
VVYRVHVSEGKPYVTILDYAERLGADLIVMPSHKRSKIDKVMLGSVASKVVENSPINVMVVKPQG

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI87081893, Length=145, Percent_Identity=32.4137931034483, Blast_Score=70, Evalue=7e-14,
Organism=Escherichia coli, GI1786824, Length=145, Percent_Identity=33.7931034482759, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16150; Mature: 16150

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQILVPVDLNEKGFADKAVELAVWHAKQSNAELHLLNVLPGIHMSMVSTYFPKDAAKQ
CCCEEEEEECCCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHH
MKADVSEQLNKFAAKFVDEEVVYRVHVSEGKPYVTILDYAERLGADLIVMPSHKRSKIDK
HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEHHHHHCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MYKQILVPVDLNEKGFADKAVELAVWHAKQSNAELHLLNVLPGIHMSMVSTYFPKDAAKQ
CCCEEEEEECCCCCCCCCHHHEEEEEECCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHH
MKADVSEQLNKFAAKFVDEEVVYRVHVSEGKPYVTILDYAERLGADLIVMPSHKRSKIDK
HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEHHHHHCCCEEEECCCCHHHHHH
VMLGSVASKVVENSPINVMVVKPQG
HHHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]