| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710815
Identifier: 59710815
GI number: 59710815
Start: 230932
End: 231285
Strand: Reverse
Name: 59710815
Synonym: VF_0208
Alternate gene names: NA
Gene position: 231285-230932 (Counterclockwise)
Preceding gene: 59710816
Following gene: 59710813
Centisome position: 7.98
GC content: 40.96
Gene sequence:
>354_bases ATGCCGCAATCACATCGCAACCTATCCATCCCCTCATTTGATGAGCTAAAAGCATTAGCAGAAAAAGATCCAGAACAACT GGAAGCATTACGTCATCAACTAAGTATGGAGTTTATTGAAAGTGTTCCAGAAGAACATCAAGGACCACTGCTTGCACAGC AAAGTCATATTGAACGCATTATTGAGCGAGGCAACAATCCAAATCATGTAAATATTCTTCTAGGACGAGAGCTTGGAAAG CAATTCGTTCGCTTTGCTGATTCACTCAACAAACCCATTGATGAGCATCAAGCTGCAGATGTTATTCAATTTCCTAACGC CACTTCTCGCCCATCAAATAATACGAAGCATTAG
Upstream 100 bases:
>100_bases AAAAGCGAGACTCCGATTCAATCCCCCCAACTCTACTTTCTCAAAACCTGAAAACTTCAACTAAGCTGAATCTATAAAAG CAAAAACAAGGAATCAGTTT
Downstream 100 bases:
>100_bases GTAAGACGAAAGCTCTAACCTATTTTTTGAAAACTCTCATGTTCCATGTCACGCACGTTGATAGTTAAGCTATCAATGTG ACTGGCTTGTTCAGCAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MPQSHRNLSIPSFDELKALAEKDPEQLEALRHQLSMEFIESVPEEHQGPLLAQQSHIERIIERGNNPNHVNILLGRELGK QFVRFADSLNKPIDEHQAADVIQFPNATSRPSNNTKH
Sequences:
>Translated_117_residues MPQSHRNLSIPSFDELKALAEKDPEQLEALRHQLSMEFIESVPEEHQGPLLAQQSHIERIIERGNNPNHVNILLGRELGK QFVRFADSLNKPIDEHQAADVIQFPNATSRPSNNTKH >Mature_116_residues PQSHRNLSIPSFDELKALAEKDPEQLEALRHQLSMEFIESVPEEHQGPLLAQQSHIERIIERGNNPNHVNILLGRELGKQ FVRFADSLNKPIDEHQAADVIQFPNATSRPSNNTKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13332; Mature: 13201
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSHRNLSIPSFDELKALAEKDPEQLEALRHQLSMEFIESVPEEHQGPLLAQQSHIERI CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH IERGNNPNHVNILLGRELGKQFVRFADSLNKPIDEHQAADVIQFPNATSRPSNNTKH HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PQSHRNLSIPSFDELKALAEKDPEQLEALRHQLSMEFIESVPEEHQGPLLAQQSHIERI CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHH IERGNNPNHVNILLGRELGKQFVRFADSLNKPIDEHQAADVIQFPNATSRPSNNTKH HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA