| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59710768
Identifier: 59710768
GI number: 59710768
Start: 179151
End: 179399
Strand: Reverse
Name: 59710768
Synonym: VF_0161
Alternate gene names: NA
Gene position: 179399-179151 (Counterclockwise)
Preceding gene: 59710809
Following gene: 172087643
Centisome position: 6.19
GC content: 49.4
Gene sequence:
>249_bases ATGAAAAAGACTGCTATTGCTCTTATGTTAGCGATGACGGCTGGATCTGCATTTGCTGCTGCTGAAGCAACAACAACGAC TGCTGCTTCAACTTCTGGCTCTGCTGCTGGTACTGCTGGTGCTTCTGCAGCTGCAGCTGGCGCTGCTTCAACTACGGCTA TCGCTGTAGGTGTTGCTGCTGCTGTTGCTGTTGTAGCTGTTGCTGATTCAGGCTCAGACGCAACAACAACATCTGTAACT ACTAAGTAA
Upstream 100 bases:
>100_bases TTATGTTTACCATATGGAACTTCATATGATACCGTGCACGATGTTTGCTCAATAAGTGAGTAAATATTCACCAATATATG TAAAAATTGTAAGGTAACTT
Downstream 100 bases:
>100_bases TTTTAGTTTCAGATACAGGGGACGAGGGATGAGGAACTAAATTCTAGGCTCTCACTTTCGTCCCTTTTTACTTATATCTC GCCCTCTAAACCAACCTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MKKTAIALMLAMTAGSAFAAAEATTTTAASTSGSAAGTAGASAAAAGAASTTAIAVGVAAAVAVVAVADSGSDATTTSVT TK
Sequences:
>Translated_82_residues MKKTAIALMLAMTAGSAFAAAEATTTTAASTSGSAAGTAGASAAAAGAASTTAIAVGVAAAVAVVAVADSGSDATTTSVT TK >Mature_82_residues MKKTAIALMLAMTAGSAFAAAEATTTTAASTSGSAAGTAGASAAAAGAASTTAIAVGVAAAVAVVAVADSGSDATTTSVT TK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7281; Mature: 7281
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTAIALMLAMTAGSAFAAAEATTTTAASTSGSAAGTAGASAAAAGAASTTAIAVGVAA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AVAVVAVADSGSDATTTSVTTK HHHHHEECCCCCCCCEEEEECC >Mature Secondary Structure MKKTAIALMLAMTAGSAFAAAEATTTTAASTSGSAAGTAGASAAAAGAASTTAIAVGVAA CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AVAVVAVADSGSDATTTSVTTK HHHHHEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA