| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is coaD [H]
Identifier: 59710739
GI number: 59710739
Start: 149887
End: 150375
Strand: Reverse
Name: coaD [H]
Synonym: VF_0132
Alternate gene names: 59710739
Gene position: 150375-149887 (Counterclockwise)
Preceding gene: 59710740
Following gene: 59710732
Centisome position: 5.19
GC content: 40.08
Gene sequence:
>489_bases ATGACTAAATTAACGCTTTATCCCGGTACGTTTGATCCTATCACTAATGGACATTTGGATTTAATTAAACGTTCTGCCTC CATGTTTGATCACATCATTGTTGCAGTGGCGGCAAGCCCAAGTAAGAAAACACTGTTTACTTTAGACGAACGTGTTCAAC TGGTGCAAGCCGTAACGAAAGATCTTCCTAATGTTTATGTTGAAGGTTTCTCTGGATTGATGGTGGATTTTGCCAAAGAA AAAAAGGCCAACTTATTGGTGCGTGGGCTAAGAACCACCATGGATTTTGAGTACGAATTTGGCTTAACCAGTATGTATCG TAAATTAATGCCTGAATTAGAGAGTGTGTTTCTTACGCCTTCTGAGGAGTATGCGTTTCTCTCTTCGACCATTGTTCGTG AAGTAGCGTTGCATGGAGGAAGTGTGGAAGCCTTTGTTCCTTCTTCGGTTAATCAAGCATTAAAAAATAAAGTTGCGTCA TCATTGTAA
Upstream 100 bases:
>100_bases AAAGAACGCTTAATTGAAGGAGGACGAGAAAAATTAACCTCCTTTATGATTGAGCATACTGCGGCTCTGTATTTCAAGGT TTATCAACGAGCTTTACAAC
Downstream 100 bases:
>100_bases TACGTTAAAAAAGGCCACTTAAATAAGTGGCCTATGATAACGATTAATGAACGCCTTTTACTTGGCCATTAATGTATAAG GTTTGCAATGTGTGGTAATC
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MTKLTLYPGTFDPITNGHLDLIKRSASMFDHIIVAVAASPSKKTLFTLDERVQLVQAVTKDLPNVYVEGFSGLMVDFAKE KKANLLVRGLRTTMDFEYEFGLTSMYRKLMPELESVFLTPSEEYAFLSSTIVREVALHGGSVEAFVPSSVNQALKNKVAS SL
Sequences:
>Translated_162_residues MTKLTLYPGTFDPITNGHLDLIKRSASMFDHIIVAVAASPSKKTLFTLDERVQLVQAVTKDLPNVYVEGFSGLMVDFAKE KKANLLVRGLRTTMDFEYEFGLTSMYRKLMPELESVFLTPSEEYAFLSSTIVREVALHGGSVEAFVPSSVNQALKNKVAS SL >Mature_161_residues TKLTLYPGTFDPITNGHLDLIKRSASMFDHIIVAVAASPSKKTLFTLDERVQLVQAVTKDLPNVYVEGFSGLMVDFAKEK KANLLVRGLRTTMDFEYEFGLTSMYRKLMPELESVFLTPSEEYAFLSSTIVREVALHGGSVEAFVPSSVNQALKNKVASS L
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=159, Percent_Identity=59.1194968553459, Blast_Score=204, Evalue=2e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 17956; Mature: 17825
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTLYPGTFDPITNGHLDLIKRSASMFDHIIVAVAASPSKKTLFTLDERVQLVQAVTK CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH DLPNVYVEGFSGLMVDFAKEKKANLLVRGLRTTMDFEYEFGLTSMYRKLMPELESVFLTP HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHEECCC SEEYAFLSSTIVREVALHGGSVEAFVPSSVNQALKNKVASSL CHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCC >Mature Secondary Structure TKLTLYPGTFDPITNGHLDLIKRSASMFDHIIVAVAASPSKKTLFTLDERVQLVQAVTK CEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH DLPNVYVEGFSGLMVDFAKEKKANLLVRGLRTTMDFEYEFGLTSMYRKLMPELESVFLTP HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHEECCC SEEYAFLSSTIVREVALHGGSVEAFVPSSVNQALKNKVASSL CHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA