| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617541
Identifier: 58617541
GI number: 58617541
Start: 1301867
End: 1302571
Strand: Reverse
Name: 58617541
Synonym: ERGA_CDS_08140
Alternate gene names: NA
Gene position: 1302571-1301867 (Counterclockwise)
Preceding gene: 58617542
Following gene: 58617539
Centisome position: 86.84
GC content: 31.35
Gene sequence:
>705_bases ATGAGTGATACTAATAATTTTCAGTCTATTAAAGACGTAATTGCTAACATTAGGAAAGTTATGTCTAGCAATGATACGGC AGATTTGGTTACTGATCAACAGGATACTAGTAATGAAGTGTTAAACTTAGAAGATCCAGAAAATATTGTGGAGTTAAATA ATATACAGTGTGCACGTAATACATTAAGTGAAATCAATCAAACATTTCAAGCTATGGCTAATTTTTCAACAACGGTGCCC ATAAGTCCAGTGTCTCAGATCAATATAAAACCTGATATAGAAGTAGCAATGACAAGAGAAAAAATTTATCCTGATCAGCT ATCTAGTATGAATCAGTTTATATCTATAGAGCAATCGTCTCAAAAAAGGCGGTTAACAACAAAACATACTATATCAGAAG GATTATCAAAAATTGAAGGTACTGCATCATCAGAAATTAAAGAAATACATCACCAGAACTTGCTGTCTCCTGAAAATGTT TTTGCAAGTAGTGAGGAAATAAAAAAACTCATCACACAAATACATCATTATACTACATTGCCTAGTGTTACTGCTCAAGA TAAAAGCCCTACTATAGAAGAGTTGGTAATAAGTATACTCAAACCAGAGTTATCTACATGGCTTAACAATAATCTACAAA AAATAGTACAAGATATTGTTGAACGGGAAATTAAACATATAGTAAAAAAATCAAATCAAGGTTAG
Upstream 100 bases:
>100_bases ATTTAGTTAATGTACAGAGTAATGTTATTATTAGTATATATAATTTACTTGCTTTGATTGGACAATTGAATATTAATTAA TTATTTAATATGATAAATTT
Downstream 100 bases:
>100_bases GGAAATTTAGATATATTAGTTTTCTTTATAATATTAAATGTTGAGAGTTATAGGTTTAAGCTGGTACTTTGTAATGTTAT AAAGGAATGAGGTTACTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDTNNFQSIKDVIANIRKVMSSNDTADLVTDQQDTSNEVLNLEDPENIVELNNIQCARNTLSEINQTFQAMANFSTTVP ISPVSQINIKPDIEVAMTREKIYPDQLSSMNQFISIEQSSQKRRLTTKHTISEGLSKIEGTASSEIKEIHHQNLLSPENV FASSEEIKKLITQIHHYTTLPSVTAQDKSPTIEELVISILKPELSTWLNNNLQKIVQDIVEREIKHIVKKSNQG
Sequences:
>Translated_234_residues MSDTNNFQSIKDVIANIRKVMSSNDTADLVTDQQDTSNEVLNLEDPENIVELNNIQCARNTLSEINQTFQAMANFSTTVP ISPVSQINIKPDIEVAMTREKIYPDQLSSMNQFISIEQSSQKRRLTTKHTISEGLSKIEGTASSEIKEIHHQNLLSPENV FASSEEIKKLITQIHHYTTLPSVTAQDKSPTIEELVISILKPELSTWLNNNLQKIVQDIVEREIKHIVKKSNQG >Mature_233_residues SDTNNFQSIKDVIANIRKVMSSNDTADLVTDQQDTSNEVLNLEDPENIVELNNIQCARNTLSEINQTFQAMANFSTTVPI SPVSQINIKPDIEVAMTREKIYPDQLSSMNQFISIEQSSQKRRLTTKHTISEGLSKIEGTASSEIKEIHHQNLLSPENVF ASSEEIKKLITQIHHYTTLPSVTAQDKSPTIEELVISILKPELSTWLNNNLQKIVQDIVEREIKHIVKKSNQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26382; Mature: 26251
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTNNFQSIKDVIANIRKVMSSNDTADLVTDQQDTSNEVLNLEDPENIVELNNIQCARN CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH TLSEINQTFQAMANFSTTVPISPVSQINIKPDIEVAMTREKIYPDQLSSMNQFISIEQSS HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH QKRRLTTKHTISEGLSKIEGTASSEIKEIHHQNLLSPENVFASSEEIKKLITQIHHYTTL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCC PSVTAQDKSPTIEELVISILKPELSTWLNNNLQKIVQDIVEREIKHIVKKSNQG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SDTNNFQSIKDVIANIRKVMSSNDTADLVTDQQDTSNEVLNLEDPENIVELNNIQCARN CCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHCCHHHHHH TLSEINQTFQAMANFSTTVPISPVSQINIKPDIEVAMTREKIYPDQLSSMNQFISIEQSS HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH QKRRLTTKHTISEGLSKIEGTASSEIKEIHHQNLLSPENVFASSEEIKKLITQIHHYTTL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCC PSVTAQDKSPTIEELVISILKPELSTWLNNNLQKIVQDIVEREIKHIVKKSNQG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA