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The map label for this gene is yfiO [C]

Identifier: 58617537

GI number: 58617537

Start: 1296486

End: 1297238

Strand: Reverse

Name: yfiO [C]

Synonym: ERGA_CDS_08100

Alternate gene names: 58617537

Gene position: 1297238-1296486 (Counterclockwise)

Preceding gene: 58617539

Following gene: 58617532

Centisome position: 86.49

GC content: 31.61

Gene sequence:

>753_bases
ATGTATCACTTGAAGGTTTTTAAGAATATATTAGTTCTGATAAGTTGCCTTTTTATTGTTAGTTGTGTTTTCTTGAGTAA
GGAACGTGTTGTAAAATCTGTTGAAAATAGAACAGCGGATGGAATATATGAGAGTGCTTTAAAGAAGTCTAGTAATAAAC
AGTATAAGGATGCTGTGAAAGATCTTGAAGAAATAGATAGTCTATATCCATTCTCTCCAGTAGCTATTAAAGCTCGTATT
ATGATGTCATTTTTAAATTATGAATTAGAAAATTATTCACGTGCGGCAACTTATGCAGAAGATTATATAAATCTGTATCC
TGATAGTGAGGATATAGATGTTGCGTATTATTTACGTATTATGGCAAATTACATGCAGATTAATGATATAGACCGTGACC
AAAGTGTTGCATATAAAGTTTCAGAATTATTAGATGAATTTGTACGTTTGTTCCCTAATTCTCAGTATTTAGAAGAAGTG
AACTTAAGATTAAACATGGTGCATGAGCATATTGCGGCAAAAGAATTTTCAATAGGTAAATTTTATTTACAACGTGGAGA
GTATGTTGCTGCTATTAGAAGATTTAGTACTATCCTGAAGCGTTACAAGAATACAAGATATTTTCCAGAAAGTGTCTATA
GAACTGCTGAAGCGTATTTATCTCTAGGAGATAAGGATGCTTATAAAAAGTATATATCTTTACTACAGGAATGCTGTGTA
GGTAGTGAGTGGTATGTATTGTCCCATAACTAA

Upstream 100 bases:

>100_bases
CTTTTTATACAAGGGTGTGCGTAAAAATTGCTTGTCTCAGACAGATCTTTATGTTTCAATAAGTTTTAATTTTTATATTA
TATAGTATAGGTGATTAATT

Downstream 100 bases:

>100_bases
AAAAGACTTTTCGGTAAAATGGGACTCAATGAATATAGAGTACGTTCTGTATAAAGGGTGTGGTATTTAATTGTATATAC
CTGTGTGGTATACTTTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MYHLKVFKNILVLISCLFIVSCVFLSKERVVKSVENRTADGIYESALKKSSNKQYKDAVKDLEEIDSLYPFSPVAIKARI
MMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEV
NLRLNMVHEHIAAKEFSIGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCV
GSEWYVLSHN

Sequences:

>Translated_250_residues
MYHLKVFKNILVLISCLFIVSCVFLSKERVVKSVENRTADGIYESALKKSSNKQYKDAVKDLEEIDSLYPFSPVAIKARI
MMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEV
NLRLNMVHEHIAAKEFSIGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCV
GSEWYVLSHN
>Mature_250_residues
MYHLKVFKNILVLISCLFIVSCVFLSKERVVKSVENRTADGIYESALKKSSNKQYKDAVKDLEEIDSLYPFSPVAIKARI
MMSFLNYELENYSRAATYAEDYINLYPDSEDIDVAYYLRIMANYMQINDIDRDQSVAYKVSELLDEFVRLFPNSQYLEEV
NLRLNMVHEHIAAKEFSIGKFYLQRGEYVAAIRRFSTILKRYKNTRYFPESVYRTAEAYLSLGDKDAYKKYISLLQECCV
GSEWYVLSHN

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=201, Percent_Identity=27.363184079602, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29372; Mature: 29372

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEEEECC
>Mature Secondary Structure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CCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]