| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is metG [H]
Identifier: 58617532
GI number: 58617532
Start: 1288590
End: 1290110
Strand: Reverse
Name: metG [H]
Synonym: ERGA_CDS_08050
Alternate gene names: 58617532
Gene position: 1290110-1288590 (Counterclockwise)
Preceding gene: 58617537
Following gene: 58617527
Centisome position: 86.01
GC content: 31.03
Gene sequence:
>1521_bases ATGAGAAATATATATGTGACTACTCCTATTTATTATGTTAATGATGTTCCACATATAGGGCATGTCTATACAACTTTAAT ATCTGATATTATTGCAAGGTTTAAGCGTCTTGATGGTTATAATGTAAAGTTTATTACTGGGACTGATGAACATGGTCAGA AAATAGAAAAAGCAGCTGCAAAGGCTAATAAATCATTAGTGGAGTTTACTGATCATGCTAGTGCTATTTTTCAACACTTA ACAGGTGTTATGAACTTTAGTCATGATGATTTTATTCGTACAACGGAAATCAGGCATAAAAAGGCAGTTACAGAATTATG GAGACGTTTATATCATTATGGGAAGATATATTTAGGTAATTATTCTGGATGGTATGCAGTTAGGGATGAAACATTTTACC AAGAGAAAGAGTTAATTGATGGCAAAGCTCCTACTGGTGCTGAAGTAGAATGGGTAGAAGAGCCGAGTTATTTTTTTCGG TTATCTCATTTTCAAGAAAGGTTATTAGATTTTTATGATAAACATCCGAATTTTATTATACCTAGACATCGTTATAATGA AGTTATCTCTTTTGTTAAGTCTGGATTGAAAGATATTTCTATATCACGACAAAATATTTCTTGGGGGATAAGTGTACCGG AGGATGATAATCATATTATTTATGTATGGATTGATGCTTTAACAAATTACTTAACAACTCTGGGGTTTCCTGAGATTAAT AGTAGTGAATATAAAAATTATTGGGTTGATGAAAATAGTACAGTTGTTCATGTAGTAGGAAAGGATATATTGAGATTTCA TGCAGTATATTGGCCAGCTATTTTAATGGCTGCTGAGTTACCATTGCCTAAACAAATTTTAGCACATGGTTGGTGGACTA ATGAAGGACAGAAGATTTCCAAATCATTAGGAAATGTAATTAATCCTTTTGAATTAATTGAAGAATTTGGTGTTGATCAG GTGAGGTACTTCTTAATTAAAGAAATGCCAGTAGGTAATGATGGTGATTATAAGAGAAATAGTATTATTAGTTGTATAAA TTGTGATTTAGCAAATAATATTGGTAATTTAGTACAGAGAACTGTTTCGCTTTTGCATAAAGAATGTCATGGAACAATAC CAAATGTGGCAAGTAGTCTATTTCAGGATGAGGATGCTTTACCAAATTATCAAGAGATTTTGGAAAATGTTAGAATTTGT ATTAATCAGTACAACCTTAATGGTGTGATACATATTGTAGAAGAATTGTCGTCTATGGCAAATGAATATATTGCATTTAG AGCTCCATGGAAGTTATCTAAAACTGATCCTATAGTTATGCAAGCTGTGTTATATAAGTTACTTGAATATATAAGATGTG TTGGATTGCTATTGCAACCTATAATGCCATATTTATCATCTAAAATATTGGATCAGATTGCATTATCAGAGTACAAACGT AGTTTTAATAATTTTGCTGTACCTATAGATACGGGAATAATTTTACCAAAACCTGAACCTATTTTTACAAAAATTATATA A
Upstream 100 bases:
>100_bases GCATACTGTATCTAGTATAGTATAAATGTGTATTGTATCCTCTAAATGGAATTATTGTGATATATTGATTGTTATTATTC AGAAGTGATATTGTTGTTTT
Downstream 100 bases:
>100_bases TTTTGATAATAGTGTAATAAAATATTGTCCTATATTATTCAATATTTCAAGTAATGTTAAACGTTATGTCAATGAATGTA ATAGTATACTAATATCGACA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKANKSLVEFTDHASAIFQHL TGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNYSGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFR LSHFQERLLDFYDKHPNFIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEIN SSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQKISKSLGNVINPFELIEEFGVDQ VRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNLVQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRIC INQYNLNGVIHIVEELSSMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEYKR SFNNFAVPIDTGIILPKPEPIFTKII
Sequences:
>Translated_506_residues MRNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKANKSLVEFTDHASAIFQHL TGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNYSGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFR LSHFQERLLDFYDKHPNFIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEIN SSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQKISKSLGNVINPFELIEEFGVDQ VRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNLVQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRIC INQYNLNGVIHIVEELSSMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEYKR SFNNFAVPIDTGIILPKPEPIFTKII >Mature_506_residues MRNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAAKANKSLVEFTDHASAIFQHL TGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNYSGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFR LSHFQERLLDFYDKHPNFIIPRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEIN SSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQKISKSLGNVINPFELIEEFGVDQ VRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNLVQRTVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRIC INQYNLNGVIHIVEELSSMANEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEYKR SFNNFAVPIDTGIILPKPEPIFTKII
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=514, Percent_Identity=36.9649805447471, Blast_Score=343, Evalue=3e-94, Organism=Homo sapiens, GI14043022, Length=565, Percent_Identity=25.1327433628319, Blast_Score=142, Evalue=9e-34, Organism=Escherichia coli, GI1788432, Length=504, Percent_Identity=24.0079365079365, Blast_Score=157, Evalue=2e-39, Organism=Caenorhabditis elegans, GI212645096, Length=503, Percent_Identity=37.7733598409543, Blast_Score=310, Evalue=2e-84, Organism=Caenorhabditis elegans, GI71992781, Length=390, Percent_Identity=36.9230769230769, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17540794, Length=557, Percent_Identity=24.4165170556553, Blast_Score=141, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6321610, Length=535, Percent_Identity=34.7663551401869, Blast_Score=294, Evalue=3e-80, Organism=Saccharomyces cerevisiae, GI6321704, Length=555, Percent_Identity=24.3243243243243, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI21358483, Length=506, Percent_Identity=35.7707509881423, Blast_Score=318, Evalue=4e-87, Organism=Drosophila melanogaster, GI24655311, Length=567, Percent_Identity=27.336860670194, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 58469; Mature: 58469
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAA CCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH KANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGN HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC YSGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHPNFII CCCEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEE PRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEIN CCHHHHHHHHHHHHCHHHCEEECCCCEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC SSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQKIS CCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHH KSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNLVQR HHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHCHHHHCCCHHHHHHHHHHHH TVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGVIHIVEELSSMA HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEYKR HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFNNFAVPIDTGIILPKPEPIFTKII HHCCEEEEECCCEECCCCCCHHHCCC >Mature Secondary Structure MRNIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYNVKFITGTDEHGQKIEKAAA CCCEEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH KANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGN HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECC YSGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHPNFII CCCEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEE PRHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEIN CCHHHHHHHHHHHHCHHHCEEECCCCEECCCCCCCCCEEEEEEHHHHHHHHHHCCCCCCC SSEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAAELPLPKQILAHGWWTNEGQKIS CCCCCCEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHH KSLGNVINPFELIEEFGVDQVRYFLIKEMPVGNDGDYKRNSIISCINCDLANNIGNLVQR HHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHCHHHHCCCHHHHHHHHHHHH TVSLLHKECHGTIPNVASSLFQDEDALPNYQEILENVRICINQYNLNGVIHIVEELSSMA HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH NEYIAFRAPWKLSKTDPIVMQAVLYKLLEYIRCVGLLLQPIMPYLSSKILDQIALSEYKR HHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFNNFAVPIDTGIILPKPEPIFTKII HHCCEEEEECCCEECCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA