| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58617423
Identifier: 58617423
GI number: 58617423
Start: 1104480
End: 1105277
Strand: Reverse
Name: 58617423
Synonym: ERGA_CDS_06960
Alternate gene names: NA
Gene position: 1105277-1104480 (Counterclockwise)
Preceding gene: 58617424
Following gene: 58617418
Centisome position: 73.69
GC content: 31.08
Gene sequence:
>798_bases TTGTCATTATGGAGGATACATATGTTGAATCAAGGTAGGCTAAAGTTATCTTATGCGCCGGATTTACATATATCATATAA GCAATTAATTAGTGATAGTAATGTTTCTATTGTGTTCCTTTCTGGTTTTCAGGCAAATATGCAAGGTGCAAAAGCAACAG CATTGTATAATTACTGCAAGGCTCATAACTTTAATTTAATTTTGTTTGAATATTTAGGGCATGGTGAATCAGATGGACAG CTCATTGATTATTCTATAAGTGATTGGTACAAAAACTCTATTGATGTTATTGATCAGTTAACTCCTCCTAATAGTAGTCA TATTATTATAGGATCTAGTCTTGGGGTTTGGATGATGTTTTTATTAGCAATGTCTCACCCGCATAGAGTATCTTATTTGA TTAGTCTAGCTGGAGCACCTGATATTACAGAAAGTTTATTTAAAAGTTTAACTACAGTTCAACAAGATGAATTGCTTAAG TATGGTCATGTTACTTTCTTAAGTAGTAATGAAGATAGTCGTTCTCGTGTTATAACTAGGTATATGTTTGAGGATGGAAG GAAAAACTTAATATTAAATAGGGAGTTTATTAATATAGAGTGTCCAGTTACTCTTATTCATGGTATGAATGATACAATTG TTCCATATAATGTTTCACTAACTTTAGCAGAAAAGATAAGATCAAGTTATTTGACTTTACGATTAATCAGGTCGTCTGAT CACAGTTTGTCAGATGATATTTCTTTAACAATAATTTTTAAGGCTATAGAAGAAGCAATAGAACAGCAAAACTTATAA
Upstream 100 bases:
>100_bases CTCAGGCTTATGTTAAAGGTACACGTATGGCATTTGCTGGGATTTCAAAGCCTCAAGATATAGCAGATTTAATAGCATAT ATGAAGTCTTTAGAATAGGT
Downstream 100 bases:
>100_bases TGCTATCTATTTTTTAATATGTAGTAACATATTTTGTATTGATTGTAATCTCAATATCTTTAGTTATGCTAGTAATATTA TAAACTTATGAGTAGTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSLWRIHMLNQGRLKLSYAPDLHISYKQLISDSNVSIVFLSGFQANMQGAKATALYNYCKAHNFNLILFEYLGHGESDGQ LIDYSISDWYKNSIDVIDQLTPPNSSHIIIGSSLGVWMMFLLAMSHPHRVSYLISLAGAPDITESLFKSLTTVQQDELLK YGHVTFLSSNEDSRSRVITRYMFEDGRKNLILNREFINIECPVTLIHGMNDTIVPYNVSLTLAEKIRSSYLTLRLIRSSD HSLSDDISLTIIFKAIEEAIEQQNL
Sequences:
>Translated_265_residues MSLWRIHMLNQGRLKLSYAPDLHISYKQLISDSNVSIVFLSGFQANMQGAKATALYNYCKAHNFNLILFEYLGHGESDGQ LIDYSISDWYKNSIDVIDQLTPPNSSHIIIGSSLGVWMMFLLAMSHPHRVSYLISLAGAPDITESLFKSLTTVQQDELLK YGHVTFLSSNEDSRSRVITRYMFEDGRKNLILNREFINIECPVTLIHGMNDTIVPYNVSLTLAEKIRSSYLTLRLIRSSD HSLSDDISLTIIFKAIEEAIEQQNL >Mature_264_residues SLWRIHMLNQGRLKLSYAPDLHISYKQLISDSNVSIVFLSGFQANMQGAKATALYNYCKAHNFNLILFEYLGHGESDGQL IDYSISDWYKNSIDVIDQLTPPNSSHIIIGSSLGVWMMFLLAMSHPHRVSYLISLAGAPDITESLFKSLTTVQQDELLKY GHVTFLSSNEDSRSRVITRYMFEDGRKNLILNREFINIECPVTLIHGMNDTIVPYNVSLTLAEKIRSSYLTLRLIRSSDH SLSDDISLTIIFKAIEEAIEQQNL
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=244, Percent_Identity=30.7377049180328, Blast_Score=127, Evalue=7e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30113; Mature: 29982
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLWRIHMLNQGRLKLSYAPDLHISYKQLISDSNVSIVFLSGFQANMQGAKATALYNYCK CCEEEEEEECCCCEEEEECCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH AHNFNLILFEYLGHGESDGQLIDYSISDWYKNSIDVIDQLTPPNSSHIIIGSSLGVWMMF HCCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHCCCCCCCCEEEEECCHHHHHHH LLAMSHPHRVSYLISLAGAPDITESLFKSLTTVQQDELLKYGHVTFLSSNEDSRSRVITR HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH YMFEDGRKNLILNREFINIECPVTLIHGMNDTIVPYNVSLTLAEKIRSSYLTLRLIRSSD HHHHCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHHHHHHEEEEEEECCC HSLSDDISLTIIFKAIEEAIEQQNL CCCCCCEEEEEHHHHHHHHHHHCCC >Mature Secondary Structure SLWRIHMLNQGRLKLSYAPDLHISYKQLISDSNVSIVFLSGFQANMQGAKATALYNYCK CEEEEEEECCCCEEEEECCCCCEEHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHH AHNFNLILFEYLGHGESDGQLIDYSISDWYKNSIDVIDQLTPPNSSHIIIGSSLGVWMMF HCCCCEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHCCCCCCCCEEEEECCHHHHHHH LLAMSHPHRVSYLISLAGAPDITESLFKSLTTVQQDELLKYGHVTFLSSNEDSRSRVITR HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHH YMFEDGRKNLILNREFINIECPVTLIHGMNDTIVPYNVSLTLAEKIRSSYLTLRLIRSSD HHHHCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEEEEEEHHHHHHHHHEEEEEEECCC HSLSDDISLTIIFKAIEEAIEQQNL CCCCCCEEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA