| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is trxB [H]
Identifier: 58617077
GI number: 58617077
Start: 578328
End: 579287
Strand: Reverse
Name: trxB [H]
Synonym: ERGA_CDS_03500
Alternate gene names: 58617077
Gene position: 579287-578328 (Counterclockwise)
Preceding gene: 58617078
Following gene: 58617075
Centisome position: 38.62
GC content: 35.0
Gene sequence:
>960_bases ATGACACAAATATATAAAACTCAAGTTTTAATTTTAGGATCTGGAGCAGCAGGATGTACTGCTGCTATATATGCTGCGCG TGCAAATTTACAACCCATATTAATTACGGGAATGTGCCCTGGAGGTCAACTCACAATTACTACAGATGTAGAAAATTTTC CAGGATTTGCACATGCAGTACAAGGTCCAAATCTTATGGAACAAATGCAACAACAAGCTTATAACTCTGGAGCTAAAATT ATCTCTGATGAAATTAAAGAAATACGTACAGACATGTATCCATTTGAATGTATAGGAATATTTGATGATCATTACATTGC AAATAGTATAATTATTGCTACAGGAGCTCAAGCCAAGTGGCTAAATATAGAAAGCGAAGAAGCTTTTAAAGGTAAGGGAG TTTCAGCATGTGCTACATGTGATGGAGTTTTTTTTAGCGGAAGTGATGTTGCTGTAGTAGGAGGAGGTAATACTGCTGTA GAAGAAGCACTATATTTAACCAGACATGCAACAAAAGTATTCTTAATACACAGACGTGATAAATTACGTGCTGAACCCAT ACTACAAAAACGGTTATTCAGTAACGACAAAATACAAGTTATATGGAACAGTAGTGTTAAAGAAATACTAGGTAATAAAG AAAATGGCACTGTTGAAAAAGTAATATTAGAATCTACAAACACTGGAAATACTACTACTCTTCCAGTAAAAGGAGTGTTT ATTGCTATAGGACATGCTCCAAATACTAAGATTCTAAAGAAACCAGACAATACAAATATAGTAAGTCTAGATGATGAAGG ATATATTATTACTAATCCAAATAGCACAGTAACTAGTTGTCCAGGAATTTTTGCTGCAGGTGATGTACAAGATAAAATAT ATAGGCAGGCTGTTGTTGCAGCAGGTTCAGGGTGTATGGCAGCAATAGAAGCTGCAAAGTTTCTTTCACAACTAAAGTAG
Upstream 100 bases:
>100_bases GATAAAGGGAGATCCAGCAATGGAAGCTTCTCAACATGGCATCGAGGACTATTTAAAATCACATATAGATAATCTTGAAA AAAGTATTATGGACAAATAA
Downstream 100 bases:
>100_bases TTATAACATTCTTAACTAGATGTATTATTATCACAATGTGTTACGCGTTTTTATACTAATGGCACATAGATATTACAAAA CATCTCTGATACAATATTTA
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTQIYKTQVLILGSGAAGCTAAIYAARANLQPILITGMCPGGQLTITTDVENFPGFAHAVQGPNLMEQMQQQAYNSGAKI ISDEIKEIRTDMYPFECIGIFDDHYIANSIIIATGAQAKWLNIESEEAFKGKGVSACATCDGVFFSGSDVAVVGGGNTAV EEALYLTRHATKVFLIHRRDKLRAEPILQKRLFSNDKIQVIWNSSVKEILGNKENGTVEKVILESTNTGNTTTLPVKGVF IAIGHAPNTKILKKPDNTNIVSLDDEGYIITNPNSTVTSCPGIFAAGDVQDKIYRQAVVAAGSGCMAAIEAAKFLSQLK
Sequences:
>Translated_319_residues MTQIYKTQVLILGSGAAGCTAAIYAARANLQPILITGMCPGGQLTITTDVENFPGFAHAVQGPNLMEQMQQQAYNSGAKI ISDEIKEIRTDMYPFECIGIFDDHYIANSIIIATGAQAKWLNIESEEAFKGKGVSACATCDGVFFSGSDVAVVGGGNTAV EEALYLTRHATKVFLIHRRDKLRAEPILQKRLFSNDKIQVIWNSSVKEILGNKENGTVEKVILESTNTGNTTTLPVKGVF IAIGHAPNTKILKKPDNTNIVSLDDEGYIITNPNSTVTSCPGIFAAGDVQDKIYRQAVVAAGSGCMAAIEAAKFLSQLK >Mature_318_residues TQIYKTQVLILGSGAAGCTAAIYAARANLQPILITGMCPGGQLTITTDVENFPGFAHAVQGPNLMEQMQQQAYNSGAKII SDEIKEIRTDMYPFECIGIFDDHYIANSIIIATGAQAKWLNIESEEAFKGKGVSACATCDGVFFSGSDVAVVGGGNTAVE EALYLTRHATKVFLIHRRDKLRAEPILQKRLFSNDKIQVIWNSSVKEILGNKENGTVEKVILESTNTGNTTTLPVKGVFI AIGHAPNTKILKKPDNTNIVSLDDEGYIITNPNSTVTSCPGIFAAGDVQDKIYRQAVVAAGSGCMAAIEAAKFLSQLK
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=325, Percent_Identity=50.1538461538461, Blast_Score=299, Evalue=2e-82, Organism=Escherichia coli, GI87081763, Length=320, Percent_Identity=31.5625, Blast_Score=121, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6320560, Length=322, Percent_Identity=44.4099378881988, Blast_Score=273, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6321898, Length=326, Percent_Identity=42.0245398773006, Blast_Score=256, Evalue=4e-69,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34208; Mature: 34076
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIYKTQVLILGSGAAGCTAAIYAARANLQPILITGMCPGGQLTITTDVENFPGFAHAV CCEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHC QGPNLMEQMQQQAYNSGAKIISDEIKEIRTDMYPFECIGIFDDHYIANSIIIATGAQAKW CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEECEEEEEECCCEEE LNIESEEAFKGKGVSACATCDGVFFSGSDVAVVGGGNTAVEEALYLTRHATKVFLIHRRD EECCCCHHHCCCCCEEEEEECCEEECCCCEEEEECCCHHHHHHHHHHHCCEEEEEEEECC KLRAEPILQKRLFSNDKIQVIWNSSVKEILGNKENGTVEKVILESTNTGNTTTLPVKGVF CCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEEE IAIGHAPNTKILKKPDNTNIVSLDDEGYIITNPNSTVTSCPGIFAAGDVQDKIYRQAVVA EEEECCCCCCEEECCCCCCEEEECCCCEEEECCCCCEECCCCCEEECCHHHHHHHHHHHH AGSGCMAAIEAAKFLSQLK CCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TQIYKTQVLILGSGAAGCTAAIYAARANLQPILITGMCPGGQLTITTDVENFPGFAHAV CEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHC QGPNLMEQMQQQAYNSGAKIISDEIKEIRTDMYPFECIGIFDDHYIANSIIIATGAQAKW CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEECEEEEEECCCEEE LNIESEEAFKGKGVSACATCDGVFFSGSDVAVVGGGNTAVEEALYLTRHATKVFLIHRRD EECCCCHHHCCCCCEEEEEECCEEECCCCEEEEECCCHHHHHHHHHHHCCEEEEEEEECC KLRAEPILQKRLFSNDKIQVIWNSSVKEILGNKENGTVEKVILESTNTGNTTTLPVKGVF CCCCCHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEEEEE IAIGHAPNTKILKKPDNTNIVSLDDEGYIITNPNSTVTSCPGIFAAGDVQDKIYRQAVVA EEEECCCCCCEEECCCCCCEEEECCCCEEEECCCCCEECCCCCEEECCHHHHHHHHHHHH AGSGCMAAIEAAKFLSQLK CCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]