| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616981
Identifier: 58616981
GI number: 58616981
Start: 417601
End: 418128
Strand: Reverse
Name: 58616981
Synonym: ERGA_CDS_02540
Alternate gene names: NA
Gene position: 418128-417601 (Counterclockwise)
Preceding gene: 58616984
Following gene: 58616980
Centisome position: 27.88
GC content: 29.92
Gene sequence:
>528_bases ATGTTGAGACTTAGTTTTATATTTATAATGTTAATCACATTACTTACATACCAGAATGGGTATTCTGCAAAATCCCCTGA TCCTGTGAACATAAAACTAATAGTAGGATCAATGGATATGAAAAATAGAACTATCAACATAGGAGTTGAATTTAGAATTC AGGATGGATGGCATATTTATTATAAATCACCAGGAGATCTTGGATTGCCAACAGTATTTCAATGGCAAGAGAACATTTTT AAAGATGTACAAATACACTGGCCACAACCTATACAACACACAGATACAACAAGTAACAACATCTTCCATAGCAATGTTTA CAAAGACATTGTAATGTTCCCTATTTCATTTGCTCTCAAACATGACAACCTAAACAATAAAGAACTAAGTATTAGTTTAC GTATCAAATACGCAGTATGCAAGGATGTATGTATTCCCCAAGAAAAAGTTATTATATTAAATCGTTTTTTACAGGATTAC GTTAATCAAGAAAATTTAGGATTAATAAATTTTTGGAAAAAAAAATAA
Upstream 100 bases:
>100_bases CTAGGTATATAGAACTCTATCAATAAAAACCACAATAGATTCGATCTTGAAGAACATAATAATATGAGTTATCATAACAG CATGTAATCTTAGGGAGATC
Downstream 100 bases:
>100_bases CACTCTAAAGAGTAATAAGACTAATTACACACAATACGTTTAGTAAAACAACAACATAACTACAACACTATTTATCAAAG TAAATATATATTTCTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY VNQENLGLINFWKKK
Sequences:
>Translated_175_residues MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY VNQENLGLINFWKKK >Mature_175_residues MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIYYKSPGDLGLPTVFQWQENIF KDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALKHDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDY VNQENLGLINFWKKK
Specific function: Unknown
COG id: COG4233
COG function: function code OC; Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20535; Mature: 20535
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIY CEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCEEEE YKSPGDLGLPTVFQWQENIFKDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALK EECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHEEEEEE HDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDYVNQENLGLINFWKKK CCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC >Mature Secondary Structure MLRLSFIFIMLITLLTYQNGYSAKSPDPVNIKLIVGSMDMKNRTINIGVEFRIQDGWHIY CEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCEEEE YKSPGDLGLPTVFQWQENIFKDVQIHWPQPIQHTDTTSNNIFHSNVYKDIVMFPISFALK EECCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHEEEEEE HDNLNNKELSISLRIKYAVCKDVCIPQEKVIILNRFLQDYVNQENLGLINFWKKK CCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA