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The map label for this gene is 58616880

Identifier: 58616880

GI number: 58616880

Start: 253372

End: 255000

Strand: Reverse

Name: 58616880

Synonym: ERGA_CDS_01530

Alternate gene names: NA

Gene position: 255000-253372 (Counterclockwise)

Preceding gene: 58616897

Following gene: 58616879

Centisome position: 17.0

GC content: 31.49

Gene sequence:

>1629_bases
ATGAATATAGATAATTTATTGTTCATACCATTGGGTGGAGTTGGACAAATAGGTATGAATGTTAATTTATACCACTTTAA
AGGCAAGTGGGTTATAATTGACTTTGGAGCAGGTTTTGCTGATGACAACATGCCAGGAATAGACATGATTGTTGCTGATA
TTAGTTTCATTAAGCAAAACAAAAAAGATCTACTAGGAATAGTATTAACACATGCTCATGAAGATCACATAGGAGGTATA
CAATATTTATGGCATGACTTACGGTGCCCAATATATGCTACTAAGTTTACTGCTTCACTGTTAAACTCAAAATTGAAAGA
ATGCTCACTAAACGCTAATATTACCCAAATAGATCCTTCTCAGAAGCTGATATTAGGACCATTTACTCTTGAATTCATAA
ATATGACGCATTCTATACCAGAAATGAATGCAATAGCATTACACACCGAAAAAGGAACAGTAATACATACAGGAGATTGG
AAATTAGACAATAATCCTGTAATCAGCCCTTTATCTAATACAAAAAGGCTACAGGAACTAGGAGATCAAGGAGTATTAGC
ACTTGTATGTGATTCAACTAATATTTTCACCAAAAAAAAATCAGGCTCAGAAGGTGATTTAGAAGAAAGTTTATTTAACA
TACTCAAAACTTGTAATAACAGAGTTGCTATATCCCTATTCGCTTCTAATATTGCAAGAATCAACACCATAGCATGTGTA
GCAAAGAAACTAGGCAGAAAAATAGCAATACTGGGTAAATCCCTTATAAGGATAATACAGGCAGCAAAAGATAGTGGATA
TCTTACAGATATACCAGAATTCATTGATATTAACCAAACAAACAAATTACCAAAAAATCAAATATTGCTCCTATGTACCG
GATGCCAAGGTGAACCATTAGCAGCTACTGCTAAACTTGCAAATAATTCTCATTCTTTAACAAAATTAGAAAATGAAGAT
ACTATTATTTTCTCTTCTAAAATTATTCCAGGTAATGAAAAACGCATATACAATATATTTAATAAATTTGTTAATATGGG
AGTTAATGTAATAACAGAATTTATGGAACATGTACATGTATCTGGTCACCCATCTAGGCCTGAAGTATGTACAATGTATT
CTTTAGTAAGACCTAAGCTATCTATTCCTGTACATGGAGAATATATACATATGCATGAACATGCAAAGGTTGCTCAACAA
TGTAACGTAGAAAAAGCAATTATAGTTCACCCAGGAGATGTAATAGACTTAGTACACGGGAAAAAAGTTAATTCTGTAAA
ATCTGGTTATTTTGGTGTTGATGGTAATTTTCTACATCATCCACAAAGTAATGTTATTTTCATGCGAAAAAAGATGAGAG
ATGCAGGAATAATAATAGTAACACTAATCCTTAATAGAAGAAAAGAATTACTAAAGACACCAAGAATTTTCGCACCAGGA
GTTCTAGATAACTCAACTAGCAATAATTTCCTAATAAAAAAAATTACATCTAAAATCAGTTCTCAACTCCATACTAAGAA
AGAAAATAAAATTAAGCATCACATAGAGAACATAGTGTTTGACTCATTAAGGTATGATATCAAAAACAAACCATTTATTG
AAGTACAAATAGAATATGTAGATTACTAA

Upstream 100 bases:

>100_bases
AATACTTAGGTTTAAGAAATTAATGATAATTATCCTAATACTTTTCTTTAAGTATTAAATAAGGTATGCTACTTCTTGAA
GTTTTATGATGTAATAATAA

Downstream 100 bases:

>100_bases
CTAGTAATTACATTATAGACAAATCACCGATATAAAATGCTAAATATTGTACTTATCTTTTTATGTAATATATAGAACAT
GCTGTTAAAAATGTTATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: RNase J1 [H]

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQNKKDLLGIVLTHAHEDHIGGI
QYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPSQKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDW
KLDNNPVISPLSNTKRLQELGDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIACV
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTGCQGEPLAATAKLANNSHSLTKLENED
TIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHVSGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQ
CNVEKAIIVHPGDVIDLVHGKKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIENIVFDSLRYDIKNKPFIEVQIEYVDY

Sequences:

>Translated_542_residues
MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQNKKDLLGIVLTHAHEDHIGGI
QYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPSQKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDW
KLDNNPVISPLSNTKRLQELGDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIACV
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTGCQGEPLAATAKLANNSHSLTKLENED
TIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHVSGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQ
CNVEKAIIVHPGDVIDLVHGKKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIENIVFDSLRYDIKNKPFIEVQIEYVDY
>Mature_542_residues
MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQNKKDLLGIVLTHAHEDHIGGI
QYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPSQKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDW
KLDNNPVISPLSNTKRLQELGDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIACV
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTGCQGEPLAATAKLANNSHSLTKLENED
TIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHVSGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQ
CNVEKAIIVHPGDVIDLVHGKKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIENIVFDSLRYDIKNKPFIEVQIEYVDY

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 60632; Mature: 60632

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQN
CCCCCEEEEECCCCCEECCEEEEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
KKDLLGIVLTHAHEDHIGGIQYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPS
HHHHEEEEEEECCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
QKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDWKLDNNPVISPLSNTKRLQEL
CCEEECCCEEEEHHHHCCCCCCCEEEEEECCCCEEECCCEEECCCCCCCCCHHHHHHHHC
GDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIACV
CCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTGCQGEPL
HHHHCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCC
AATAKLANNSHSLTKLENEDTIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHV
CHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
SGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQCNVEKAIIVHPGDVIDLVHG
CCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCEEEECCC
KKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
CCCCCCCCCEECCCCCEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCEECCC
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIENIVFDSLRYDIKNKPFIEVQIEYV
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
DY
CC
>Mature Secondary Structure
MNIDNLLFIPLGGVGQIGMNVNLYHFKGKWVIIDFGAGFADDNMPGIDMIVADISFIKQN
CCCCCEEEEECCCCCEECCEEEEEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC
KKDLLGIVLTHAHEDHIGGIQYLWHDLRCPIYATKFTASLLNSKLKECSLNANITQIDPS
HHHHEEEEEEECCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCCEEEECCC
QKLILGPFTLEFINMTHSIPEMNAIALHTEKGTVIHTGDWKLDNNPVISPLSNTKRLQEL
CCEEECCCEEEEHHHHCCCCCCCEEEEEECCCCEEECCCEEECCCCCCCCCHHHHHHHHC
GDQGVLALVCDSTNIFTKKKSGSEGDLEESLFNILKTCNNRVAISLFASNIARINTIACV
CCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH
AKKLGRKIAILGKSLIRIIQAAKDSGYLTDIPEFIDINQTNKLPKNQILLLCTGCQGEPL
HHHHCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEECCCCCCC
AATAKLANNSHSLTKLENEDTIIFSSKIIPGNEKRIYNIFNKFVNMGVNVITEFMEHVHV
CHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCC
SGHPSRPEVCTMYSLVRPKLSIPVHGEYIHMHEHAKVAQQCNVEKAIIVHPGDVIDLVHG
CCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCEEEEECCCCEEEECCC
KKVNSVKSGYFGVDGNFLHHPQSNVIFMRKKMRDAGIIIVTLILNRRKELLKTPRIFAPG
CCCCCCCCCEECCCCCEEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHCCCCEECCC
VLDNSTSNNFLIKKITSKISSQLHTKKENKIKHHIENIVFDSLRYDIKNKPFIEVQIEYV
CCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
DY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA