| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is sphX [H]
Identifier: 58616873
GI number: 58616873
Start: 242024
End: 243052
Strand: Reverse
Name: sphX [H]
Synonym: ERGA_CDS_01460
Alternate gene names: 58616873
Gene position: 243052-242024 (Counterclockwise)
Preceding gene: 58616874
Following gene: 161986612
Centisome position: 16.2
GC content: 29.54
Gene sequence:
>1029_bases ATGAAGAAGTTTCTTTTAGTCTTATTTTTACTGCTTGTAATGTTACCCAAAGATTCTAATGCGGAACATATACATGTTGT TGGATCATCTACAGCATTTCCATTTATCGCAGCAATAGCAGAAGAATTTGGTAGGTTTTCAGATTATGGAACACCTATAA TAGAATCTGTAGGGAGTGGTATGGGTTTTAGTATGTTTTGTCAAGGTGTAGAAAACAGTACACCAGATATAGCTATGTCA TCTCGTAAGATAAAGGATGCAGAGGTAGAATTATGTAAAAGTAATGACGTTCACGATATTATTGAAATCATTATAGGATA TGATGGTATTGTTATTGCAAACTCTAACAATAGCAATAAGCTTGATTTTACAAAAAAAGATCTGTTCAAAGCTTTAAGCA AGTATGCAACATCAGAAGAATATACACATAGTATACCAGCAAATGATTTTAAGTATTGGTCAGAAATTAATAATAGGTTC CCCAATATTGATATTGAAGTTTACGGACCATACAAAAACACAGGTACTTATAATATACTAATCGAAGAAATAATGCAGGA TTCTTGTATGAATCATAAAAATTTCATTGAAGTATACCCAGACTTGAAAAAAAGACAACACGCATGCAGTATGATTCGCA ATGATGGCAAGTACATTGAAGTTGCAGCTAATGAAAACATTATTATACAAAAAATTGCAAAAAATAATGCTGCTTTTGGT ATTTTTAGTTTTAGCTTTTTAATACAAAATCAAGATAAAATACATGGAAATAAAATTGCAGGTGTGGAACCTACATATGA AACTATTTCCTCTGGAAAATATATTTTATCAAGACCTATATATGTATATATAAAACAAAAACATCTTAATAACTCTCCTG GATTAAAAGAATTTATTAAAGTAATTTTAAAACAAGAATCTATTGGTAAAAACGGATATTTAATTAGCTTAGGGTTTATA CCCTTATCAGATAAAGATCTAGAAAACACTAGAACCAGAATCACTAATATATTAGACAATGCTAGCTAA
Upstream 100 bases:
>100_bases AATTACTTTCTTTAATTAAGCAGTATCTTTAATTTAATACTTAATTAAATAGAATAGTACAGACTTTTATATAGAATCTA ACCTTTAGGATATATATCTA
Downstream 100 bases:
>100_bases ATAAGATATCATTGAACTGCCAAGTGTAAGTGGCATATAACAATCATAATTTCTTAAAAAGGATTTGACATAATTAATTG CTTATTGTTATTAGTGCTGC
Product: putative protein sphX precursor
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKKFLLVLFLLLVMLPKDSNAEHIHVVGSSTAFPFIAAIAEEFGRFSDYGTPIIESVGSGMGFSMFCQGVENSTPDIAMS SRKIKDAEVELCKSNDVHDIIEIIIGYDGIVIANSNNSNKLDFTKKDLFKALSKYATSEEYTHSIPANDFKYWSEINNRF PNIDIEVYGPYKNTGTYNILIEEIMQDSCMNHKNFIEVYPDLKKRQHACSMIRNDGKYIEVAANENIIIQKIAKNNAAFG IFSFSFLIQNQDKIHGNKIAGVEPTYETISSGKYILSRPIYVYIKQKHLNNSPGLKEFIKVILKQESIGKNGYLISLGFI PLSDKDLENTRTRITNILDNAS
Sequences:
>Translated_342_residues MKKFLLVLFLLLVMLPKDSNAEHIHVVGSSTAFPFIAAIAEEFGRFSDYGTPIIESVGSGMGFSMFCQGVENSTPDIAMS SRKIKDAEVELCKSNDVHDIIEIIIGYDGIVIANSNNSNKLDFTKKDLFKALSKYATSEEYTHSIPANDFKYWSEINNRF PNIDIEVYGPYKNTGTYNILIEEIMQDSCMNHKNFIEVYPDLKKRQHACSMIRNDGKYIEVAANENIIIQKIAKNNAAFG IFSFSFLIQNQDKIHGNKIAGVEPTYETISSGKYILSRPIYVYIKQKHLNNSPGLKEFIKVILKQESIGKNGYLISLGFI PLSDKDLENTRTRITNILDNAS >Mature_342_residues MKKFLLVLFLLLVMLPKDSNAEHIHVVGSSTAFPFIAAIAEEFGRFSDYGTPIIESVGSGMGFSMFCQGVENSTPDIAMS SRKIKDAEVELCKSNDVHDIIEIIIGYDGIVIANSNNSNKLDFTKKDLFKALSKYATSEEYTHSIPANDFKYWSEINNRF PNIDIEVYGPYKNTGTYNILIEEIMQDSCMNHKNFIEVYPDLKKRQHACSMIRNDGKYIEVAANENIIIQKIAKNNAAFG IFSFSFLIQNQDKIHGNKIAGVEPTYETISSGKYILSRPIYVYIKQKHLNNSPGLKEFIKVILKQESIGKNGYLISLGFI PLSDKDLENTRTRITNILDNAS
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38559; Mature: 38559
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLLVLFLLLVMLPKDSNAEHIHVVGSSTAFPFIAAIAEEFGRFSDYGTPIIESVGSG CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC MGFSMFCQGVENSTPDIAMSSRKIKDAEVELCKSNDVHDIIEIIIGYDGIVIANSNNSNK CCHHHHHCCCCCCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCC LDFTKKDLFKALSKYATSEEYTHSIPANDFKYWSEINNRFPNIDIEVYGPYKNTGTYNIL CCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH IEEIMQDSCMNHKNFIEVYPDLKKRQHACSMIRNDGKYIEVAANENIIIQKIAKNNAAFG HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEEE IFSFSFLIQNQDKIHGNKIAGVEPTYETISSGKYILSRPIYVYIKQKHLNNSPGLKEFIK EEEEEEEECCCCCCCCCEECCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCHHHHHH VILKQESIGKNGYLISLGFIPLSDKDLENTRTRITNILDNAS HHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKFLLVLFLLLVMLPKDSNAEHIHVVGSSTAFPFIAAIAEEFGRFSDYGTPIIESVGSG CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCC MGFSMFCQGVENSTPDIAMSSRKIKDAEVELCKSNDVHDIIEIIIGYDGIVIANSNNSNK CCHHHHHCCCCCCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCC LDFTKKDLFKALSKYATSEEYTHSIPANDFKYWSEINNRFPNIDIEVYGPYKNTGTYNIL CCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH IEEIMQDSCMNHKNFIEVYPDLKKRQHACSMIRNDGKYIEVAANENIIIQKIAKNNAAFG HHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCEEE IFSFSFLIQNQDKIHGNKIAGVEPTYETISSGKYILSRPIYVYIKQKHLNNSPGLKEFIK EEEEEEEECCCCCCCCCEECCCCCHHHHHCCCCEEEECCEEEEEEECCCCCCCCHHHHHH VILKQESIGKNGYLISLGFIPLSDKDLENTRTRITNILDNAS HHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA