| Definition | Ehrlichia ruminantium str. Gardel, complete genome. |
|---|---|
| Accession | NC_006831 |
| Length | 1,499,920 |
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The map label for this gene is 58616746
Identifier: 58616746
GI number: 58616746
Start: 21573
End: 22637
Strand: Reverse
Name: 58616746
Synonym: ERGA_CDS_00190
Alternate gene names: NA
Gene position: 22637-21573 (Counterclockwise)
Preceding gene: 58616747
Following gene: 58616745
Centisome position: 1.51
GC content: 28.45
Gene sequence:
>1065_bases ATGAGAAGCAATTTTTTTATCACAAAAAGTAACATATTATCCTTAATATCCAGCATAAGGAAAGTTATACCAGAGTTACA TTGCATTCCAAATTTAATAAAAAATAAAATTATCTTTATGAAAGAAGAAACGGTTTTATTACAAAACAAACTAAAAAATT TATTACAAACTAATATTGATCTAGGGCTATATCATTTCTATAAAGGTAACATATCAGATGCAAAGCTCAGATTTTCTCTT ATTAGGCTTTTTAAACCTAGACTACCACTAGTATATTATAATCTAGGAAGATGTTACTTTGCTTTACAAAAAATAACAAA GGCAAGACAAAATTTTATGCGTGCCATAGAGTTAGATAATAACTATGCAGATGCATTATATTACCTCAACAAGTTAAATA ATCCTCAAAATATCATCCGCATCCCTGAAAATATCATAACACAACACTTTGACTATACAGGAGAACATTTTGTAGAATAC TGGTTGATAGCTAAACAGTATAGAGCTTATGAATATGTAAAATCTTTAATAATAAATTTCTTCGGAGACAAATCTTCACA TTTAAATATTCTAGATCTTGGATGTGGCACAGGTATATGTGGTCAATTTTTAAAAATGAAAAATATAGGAAATCATATAA CAGGCATAGATTTATCAAATAAAATGATAAACATAGCAAGAGGATGTTTTGTCAATGGAAAACAAGCATACAATGAATTA ATACATATGAGTATTTATAACTTTCTTAAAAAAAATCAAGGTCAAAAAAAATACGACGTCATTATCCTAACAGAGGTATT ACAATACATTGGCAGTTTACATTATATCTTTAAATTACTAAAAACAGCATTAGAAACAGATGGGATAATAATTGGGCTTG CACGCAGAAAAAAAGGGTCCGGATTTCAATTTATTAATGAAGGTGACTTTTTTTGCCACTCTGATGAATATATAAAGTTA TCTATTAAGGAACTAGGGTTAGAATGTAGTTATTCTACCCACTGTAAAATATACGGCTCACAAGTCGAAGGAATACTATT TGTAGCCCAACTTCAAAAACCATAA
Upstream 100 bases:
>100_bases TGAAAAATTTATTCTACCAATTTAATAGCATTTTTATGTTTATCTATTATAGGATATTTATGCTATCTTTAATATTAAAT TAAAATTTGGCGAGTAATGC
Downstream 100 bases:
>100_bases TTAACCTAAACTAATACATCCATATATATTTACTACTAAAACAAGACTACTGTACTATATTTCTTTATCGAAGAAAGAAA TTAATAAATGTACATGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRSNFFITKSNILSLISSIRKVIPELHCIPNLIKNKIIFMKEETVLLQNKLKNLLQTNIDLGLYHFYKGNISDAKLRFSL IRLFKPRLPLVYYNLGRCYFALQKITKARQNFMRAIELDNNYADALYYLNKLNNPQNIIRIPENIITQHFDYTGEHFVEY WLIAKQYRAYEYVKSLIINFFGDKSSHLNILDLGCGTGICGQFLKMKNIGNHITGIDLSNKMINIARGCFVNGKQAYNEL IHMSIYNFLKKNQGQKKYDVIILTEVLQYIGSLHYIFKLLKTALETDGIIIGLARRKKGSGFQFINEGDFFCHSDEYIKL SIKELGLECSYSTHCKIYGSQVEGILFVAQLQKP
Sequences:
>Translated_354_residues MRSNFFITKSNILSLISSIRKVIPELHCIPNLIKNKIIFMKEETVLLQNKLKNLLQTNIDLGLYHFYKGNISDAKLRFSL IRLFKPRLPLVYYNLGRCYFALQKITKARQNFMRAIELDNNYADALYYLNKLNNPQNIIRIPENIITQHFDYTGEHFVEY WLIAKQYRAYEYVKSLIINFFGDKSSHLNILDLGCGTGICGQFLKMKNIGNHITGIDLSNKMINIARGCFVNGKQAYNEL IHMSIYNFLKKNQGQKKYDVIILTEVLQYIGSLHYIFKLLKTALETDGIIIGLARRKKGSGFQFINEGDFFCHSDEYIKL SIKELGLECSYSTHCKIYGSQVEGILFVAQLQKP >Mature_354_residues MRSNFFITKSNILSLISSIRKVIPELHCIPNLIKNKIIFMKEETVLLQNKLKNLLQTNIDLGLYHFYKGNISDAKLRFSL IRLFKPRLPLVYYNLGRCYFALQKITKARQNFMRAIELDNNYADALYYLNKLNNPQNIIRIPENIITQHFDYTGEHFVEY WLIAKQYRAYEYVKSLIINFFGDKSSHLNILDLGCGTGICGQFLKMKNIGNHITGIDLSNKMINIARGCFVNGKQAYNEL IHMSIYNFLKKNQGQKKYDVIILTEVLQYIGSLHYIFKLLKTALETDGIIIGLARRKKGSGFQFINEGDFFCHSDEYIKL SIKELGLECSYSTHCKIYGSQVEGILFVAQLQKP
Specific function: Unknown
COG id: COG4976
COG function: function code R; Predicted methyltransferase (contains TPR repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41037; Mature: 41037
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNFFITKSNILSLISSIRKVIPELHCIPNLIKNKIIFMKEETVLLQNKLKNLLQTNID CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCC LGLYHFYKGNISDAKLRFSLIRLFKPRLPLVYYNLGRCYFALQKITKARQNFMRAIELDN EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC NYADALYYLNKLNNPQNIIRIPENIITQHFDYTGEHFVEYWLIAKQYRAYEYVKSLIINF CHHHHHHHHHHCCCCHHEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGDKSSHLNILDLGCGTGICGQFLKMKNIGNHITGIDLSNKMINIARGCFVNGKQAYNEL CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHH IHMSIYNFLKKNQGQKKYDVIILTEVLQYIGSLHYIFKLLKTALETDGIIIGLARRKKGS HHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC GFQFINEGDFFCHSDEYIKLSIKELGLECSYSTHCKIYGSQVEGILFVAQLQKP CCEEEECCCEEECCCCEEEEEHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure MRSNFFITKSNILSLISSIRKVIPELHCIPNLIKNKIIFMKEETVLLQNKLKNLLQTNID CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHCCCC LGLYHFYKGNISDAKLRFSLIRLFKPRLPLVYYNLGRCYFALQKITKARQNFMRAIELDN EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC NYADALYYLNKLNNPQNIIRIPENIITQHFDYTGEHFVEYWLIAKQYRAYEYVKSLIINF CHHHHHHHHHHCCCCHHEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGDKSSHLNILDLGCGTGICGQFLKMKNIGNHITGIDLSNKMINIARGCFVNGKQAYNEL CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCHHHHHHH IHMSIYNFLKKNQGQKKYDVIILTEVLQYIGSLHYIFKLLKTALETDGIIIGLARRKKGS HHHHHHHHHHHCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC GFQFINEGDFFCHSDEYIKLSIKELGLECSYSTHCKIYGSQVEGILFVAQLQKP CCEEEECCCEEECCCCEEEEEHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]