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The map label for this gene is yvnA [H]

Identifier: 57651022

GI number: 57651022

Start: 2585246

End: 2585710

Strand: Reverse

Name: yvnA [H]

Synonym: SACOL2524

Alternate gene names: 57651022

Gene position: 2585710-2585246 (Counterclockwise)

Preceding gene: 57651026

Following gene: 57651021

Centisome position: 92.04

GC content: 24.52

Gene sequence:

>465_bases
GTGGATATGAAGAGAGAAGTTATTTTAAAATTACAACAATTTATTATAGAAAGAGAAAATGCCGATAAAAGAAGACAGTA
TAAAAAGGAAAATGAGGAACTAGATTTATCTCTAACACAATTTCATATCATAGAGTTGATTGATAATAATGATAAAGTGA
ATAATAAATTTTTGTCTGAAATGTTAAATGTATCAAAACCAGCAATTACTAAATCGATAAAAAAACTTTTAGCGAAAGAC
TTAGTAGTTGAATCGCACAATGAATTTAACAAAAGAGAAGTTAATTATTCATTAACACAAAAAGGAAAAAAATTATCTTA
TATACATGATGAATTACATGAAAAATCGGTAAAAAAATATGAAGAGGTACTTAAAGTCTTTGATGATGATGAAATGGCAG
TTATTATAGAGTTTTTAAACCGTAGTATAGAAGAATTAAAAAAAGAAGATGGTTTAAATGATTAA

Upstream 100 bases:

>100_bases
AACTAAGTAAATATATGTTAATTACAACAATATTTGACAAAAATGGGAGTGACAACAATAATATAGTTAACCGGTTAACT
AATGAAGAGGAGGAATAATA

Downstream 100 bases:

>100_bases
TAGTAATATCAGATTATATATTCTAGGATTTTTAGCATTTTTCGCATCATTGATTCAAAACATATACACGCCTATTATTC
CGAGACTATATGACGATTTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDMKREVILKLQQFIIERENADKRRQYKKENEELDLSLTQFHIIELIDNNDKVNNKFLSEMLNVSKPAITKSIKKLLAKD
LVVESHNEFNKREVNYSLTQKGKKLSYIHDELHEKSVKKYEEVLKVFDDDEMAVIIEFLNRSIEELKKEDGLND

Sequences:

>Translated_154_residues
MDMKREVILKLQQFIIERENADKRRQYKKENEELDLSLTQFHIIELIDNNDKVNNKFLSEMLNVSKPAITKSIKKLLAKD
LVVESHNEFNKREVNYSLTQKGKKLSYIHDELHEKSVKKYEEVLKVFDDDEMAVIIEFLNRSIEELKKEDGLND
>Mature_154_residues
MDMKREVILKLQQFIIERENADKRRQYKKENEELDLSLTQFHIIELIDNNDKVNNKFLSEMLNVSKPAITKSIKKLLAKD
LVVESHNEFNKREVNYSLTQKGKKLSYIHDELHEKSVKKYEEVLKVFDDDEMAVIIEFLNRSIEELKKEDGLND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18326; Mature: 18326

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKREVILKLQQFIIERENADKRRQYKKENEELDLSLTQFHIIELIDNNDKVNNKFLSE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCHHHHHHHHHHHHCCCCCCHHHHHHH
MLNVSKPAITKSIKKLLAKDLVVESHNEFNKREVNYSLTQKGKKLSYIHDELHEKSVKKY
HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHH
EEVLKVFDDDEMAVIIEFLNRSIEELKKEDGLND
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDMKREVILKLQQFIIERENADKRRQYKKENEELDLSLTQFHIIELIDNNDKVNNKFLSE
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCHHHHHHHHHHHHCCCCCCHHHHHHH
MLNVSKPAITKSIKKLLAKDLVVESHNEFNKREVNYSLTQKGKKLSYIHDELHEKSVKKY
HHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHH
EEVLKVFDDDEMAVIIEFLNRSIEELKKEDGLND
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]