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The map label for this gene is appB [H]

Identifier: 57650187

GI number: 57650187

Start: 1007261

End: 1008223

Strand: Direct

Name: appB [H]

Synonym: SACOL0999

Alternate gene names: 57650187

Gene position: 1007261-1008223 (Clockwise)

Preceding gene: 57650186

Following gene: 57650188

Centisome position: 35.85

GC content: 28.87

Gene sequence:

>963_bases
ATGATTAAATTAATACTTAAAAGATTAGGGTTAATGATCCCGTTACTAATTTTAATCTCAATAGTTGTATTTTCATTAGC
AATCATACAACCAGGAGATCCATTTTCAGATCTACAAAACGGTAAAATAAAACAAGAAGCAATAAATGCACAAAGGGAAA
AATTAGGTCTCAACGACTCAATACCACATCAATACATTAGATGGGTCAATCATGTTATACACGGTGATTTAGGGGAGTCA
ATCAAATATAAAAGGCCGGTAATTGATGTTATTGAGGAAAGAATTCCAAATACAATATTACTCGGTGCTATGTCATTAAT
TATTACTTATATTATCTCATTTGCTTTAGGAATAACGTCAGGTAGATATTCTTACAGTTTGACGGATTATACTGTGCAAA
TATTTAATTATTTGATGTTAGCCATTCCATCTTTTATTGCGGGAGTATTTGCAATTTTTATTTTTTCTTTTGAATTACAA
TGGTTCCCGTTTCAAGGTTCTGTTGATATTAACCTTAAAGAAGGTACTTTTGAATATTATATGAGTAAAATATATCACAC
ATTTTTACCTGCATTCACTTTAGGTTTATTATCTACTGCTGGTTATATTCAATATTTACGTAATGATATTATTGAAAATT
CTAAAAAAGATTATGTATTGACGGCAAGGTCAAAAGGATTATCTATGAATAAAATTTATAATAAACATATATTGAGAAAT
TCTCTAATACCTATTATTACATTTTTAGGTGCTGATATTGTAAGTATTTTAGGTGGAGCCGTGATTACGGAGACTATCTT
TTCATATAACGGTATCGGTAAATTATTTTTAGAATCGGTAATAGGCCAAGACTATCCATTAATGATGGCATTAACGTTAT
TTTTCTCATTTTTAGGTTTACTGGGTAATTTGATTTCTGATATTACTTATGGATTTATAGATCCAAGAATTAGAAGTAAC
TAG

Upstream 100 bases:

>100_bases
ATTGCTCAAGATATGTGCAAAAAAAGTATGCCAGAATTAAAGGACATTGGTAATGAACATCAAGTTGCTTGTTTCTACGT
AGATAAAGTAGGTGATTTAA

Downstream 100 bases:

>100_bases
GGGGGATTAGAATGCAAAATAAGTCAAAATCGCCTTTTAAAATTGCATTTTCTAAATTTATTCATAATAAAATTGCAATG
TTATCGGTTATTTTTTTATT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN

Sequences:

>Translated_320_residues
MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN
>Mature_320_residues
MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=318, Percent_Identity=31.7610062893082, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1789888, Length=323, Percent_Identity=30.3405572755418, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=30.1775147928994, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=31.3479623824451, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=31.8471337579618, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1788504, Length=289, Percent_Identity=30.7958477508651, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=28.2051282051282, Blast_Score=119, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36124; Mature: 36124

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
IPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITS
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDINLKEGTFEYY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHH
MSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGNLISDITYGFIDPRIRSN
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
IPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITS
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDINLKEGTFEYY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHH
MSKIYHTFLPAFTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGNLISDITYGFIDPRIRSN
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]