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The map label for this gene is secY [H]

Identifier: 57238695

GI number: 57238695

Start: 1746804

End: 1748069

Strand: Reverse

Name: secY [H]

Synonym: CJE1856

Alternate gene names: 57238695

Gene position: 1748069-1746804 (Counterclockwise)

Preceding gene: 57238696

Following gene: 57238693

Centisome position: 98.33

GC content: 34.12

Gene sequence:

>1266_bases
ATGAATAGAGCATTGACGAATAAGATTTTAATCACCTTAGCATTTTTATTTGCTTATAGGGTTCTGGCTTATGTGCCAGT
TCCTGGCGTCAATGCTGATGTGATTGCGGAATTTTTTAATAACAATCAAAACAATGCTTTGGGTTTATTTAATGTTTTTA
GTGGTGGAGCGGCTGAACGCTTTTCTATCATTTCTTTAGGTATTATGCCTTATATTACTGCTTCTATTATTATGGAGCTT
CTTGCAGCAACTTTTCCAAATATTGGTAAGATGAAAAAAGAGCGTGATAGTATGCAAAAATATATGCAAATTATCCGTTA
TGCGACTATTGTGATTACTTTGGTTCAAAGTATAGGCGTTGCTATAGGTTTGCAAAGCTTGCACGGTCGTGGTGGTGCAG
GGGCTATAATGGTGGAAGATTTAAATATGTTTATCGCACTTTGTGCTATTTCTATGCTTGCTGGAACTATGCTTTTAATG
TGGCTTGGCGAACAAATCACACAAAGAGGTATAGGAAATGGTATTTCTTTAATCATTTTTGCAGGTATTGTTTCAGGTAT
TCCAAGAGCGATTTCAGGAACTGTAGGACAAATCAATTCAGGCGAGATGAATTTCTTAACCGCTTTTGCAATTTTTGCTT
TGATTTTAATCACCATAGGGGTGATTATTTATATAGAACTTGGAGAAAGAAGAATTCCTATTTCTTATTCTCGTAAAGTT
GTAATGCAAAATCAAAACAAACGCATTATGAATTATATTCCTATTAAACTCAATCTTAGTGGGGTTATTCCACCGATTTT
TGCTAGTGCGATTTTGATGTTTCCAACAACAATTTTACAAACTAGTACAAATCCTTATCTACAAGCCATTAATGACTTTT
TAAATCCAAATGGTTATTTGTTTCATGTTCTAACTTTCTTGTTTGTAATTTTCTTTGCTTATTTTTATGCTTCTATCGTA
TTTAACGCTAAAGACATAGCAGAAAATTTGAAAAAACAAGGCGGTTTTATCCCTGGAATTCGTCCAGGTGAAGGAACTTC
AAGTTATCTTAACGAAGTGGCTTCTCGTTTAACTTTATCAGGTTCTATTTATTTAGGGCTTGTTGCAACCTTACCTTGGG
TTTTGGTGAAATTTATGGGTGTACCTTTTCATTTTGGCGGTACTTCTGTACTTATTGTAGTTCAAGTAGCACTTGATACG
ATGAGAAAAATTGAAGCTCAAATTTATATGAGTAAATACCAAACTTTAAGTGCGGTAGGTTTGTAA

Upstream 100 bases:

>100_bases
TTTCAAAATCTGTGAATAAAATCAAATTAATTGGTGCAAGTGCAAAAGACTTAGTATCAAAAATCAAAGACGAGAATATT
AGCGTCACCGGATCAAAATA

Downstream 100 bases:

>100_bases
TAAATAAAATTAGCAAGATTTTTCTTGCTAATTTATTCTAGGTTTTTGCTTTAAAAATAAAAACACAATGCACACTATAA
AAATTACTATTGACCATATT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAERFSIISLGIMPYITASIIMEL
LAATFPNIGKMKKERDSMQKYMQIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVIIYIELGERRIPISYSRKV
VMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIV
FNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALDT
MRKIEAQIYMSKYQTLSAVGL

Sequences:

>Translated_421_residues
MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAERFSIISLGIMPYITASIIMEL
LAATFPNIGKMKKERDSMQKYMQIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVIIYIELGERRIPISYSRKV
VMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIV
FNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALDT
MRKIEAQIYMSKYQTLSAVGL
>Mature_421_residues
MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAERFSIISLGIMPYITASIIMEL
LAATFPNIGKMKKERDSMQKYMQIIRYATIVITLVQSIGVAIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLM
WLGEQITQRGIGNGISLIIFAGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVIIYIELGERRIPISYSRKV
VMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYLFHVLTFLFVIFFAYFYASIV
FNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLSGSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALDT
MRKIEAQIYMSKYQTLSAVGL

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=421, Percent_Identity=41.3301662707838, Blast_Score=304, Evalue=7e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46050; Mature: 46050

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAER
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEHHCCCCHHH
FSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYMQIIRYATIVITLVQSIGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLMWLGEQITQRGIGNGISLIIF
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVIIYIELGERRIPISYSRKV
HHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCEECCHHHCCCE
VMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYL
EECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
FHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEC
GSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALDTMRKIEAQIYMSKYQTLSAVG
CHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MNRALTNKILITLAFLFAYRVLAYVPVPGVNADVIAEFFNNNQNNALGLFNVFSGGAAER
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEEHHCCCCHHH
FSIISLGIMPYITASIIMELLAATFPNIGKMKKERDSMQKYMQIIRYATIVITLVQSIGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIGLQSLHGRGGAGAIMVEDLNMFIALCAISMLAGTMLLMWLGEQITQRGIGNGISLIIF
HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AGIVSGIPRAISGTVGQINSGEMNFLTAFAIFALILITIGVIIYIELGERRIPISYSRKV
HHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCEECCHHHCCCE
VMQNQNKRIMNYIPIKLNLSGVIPPIFASAILMFPTTILQTSTNPYLQAINDFLNPNGYL
EECCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
FHVLTFLFVIFFAYFYASIVFNAKDIAENLKKQGGFIPGIRPGEGTSSYLNEVASRLTLS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEEC
GSIYLGLVATLPWVLVKFMGVPFHFGGTSVLIVVQVALDTMRKIEAQIYMSKYQTLSAVG
CHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]