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The map label for this gene is ytfH [C]

Identifier: 57238564

GI number: 57238564

Start: 1616167

End: 1616514

Strand: Direct

Name: ytfH [C]

Synonym: CJE1717

Alternate gene names: 57238564

Gene position: 1616167-1616514 (Clockwise)

Preceding gene: 57238561

Following gene: 57238566

Centisome position: 90.91

GC content: 30.75

Gene sequence:

>348_bases
ATGACTAAAGAGAATTCTCAGTGCAATTTCGAAGAATGTGGATTTAACTATACTCTAGCATTAATTAATGGAAAATATAA
AATGAGTATTTTATACTGCTTATTTCGCTATGAAATCGTACGTTATAATGAACTCAAACGCTTTTTAAGCTCCATATCTT
TTAAAACTTTAACCAATACCTTAAGAGAACTAGAAAACGATGGTTTAATTATCAGAAAAGAATACGCTCAAATTCCACCC
AAGGTAGAATATAGCTTATCCAAACGTGGACAAAGTTTAATTCCCATTTTACAAGCTATGAGCAAATGGGGCAAGAAAGA
CAAAAAAGGGAAAAAATGCTTGAATTAA

Upstream 100 bases:

>100_bases
TTTTTATCCTTTTTTAAATTTTATGATACAATTATAACTTAGCATAATATCATTTTCAATACAGAAAATAAAGTAATATA
CTATACTAAAGGAATGTTAA

Downstream 100 bases:

>100_bases
TTGGCGAACTTTCTTTGCAAAATTATATGGGAGAATGGCTTGAAATGGCTAGAAAACCGGCCTTTTTTCAAAAATCTTGC
CTAAATTCAAAGGCAAAATA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MTKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPP
KVEYSLSKRGQSLIPILQAMSKWGKKDKKGKKCLN

Sequences:

>Translated_115_residues
MTKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPP
KVEYSLSKRGQSLIPILQAMSKWGKKDKKGKKCLN
>Mature_114_residues
TKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNTLRELENDGLIIRKEYAQIPPK
VEYSLSKRGQSLIPILQAMSKWGKKDKKGKKCLN

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13503; Mature: 13372

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNT
CCCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSKWGKKDKKGKKCLN
HHHHCCCCEEEEHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TKENSQCNFEECGFNYTLALINGKYKMSILYCLFRYEIVRYNELKRFLSSISFKTLTNT
CCCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRELENDGLIIRKEYAQIPPKVEYSLSKRGQSLIPILQAMSKWGKKDKKGKKCLN
HHHHCCCCEEEEHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10086842; 11058132 [H]