| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is galK [H]
Identifier: 57238460
GI number: 57238460
Start: 1511973
End: 1512992
Strand: Reverse
Name: galK [H]
Synonym: CJE1610
Alternate gene names: 57238460
Gene position: 1512992-1511973 (Counterclockwise)
Preceding gene: 57238461
Following gene: 57238459
Centisome position: 85.1
GC content: 32.94
Gene sequence:
>1020_bases ATGAAAACCATACGCACACAAACTCCTCTTCGCCTTGGTTTAGCAGGTGGAGGGACTGATATAAATTTATATTGTGATAA ATACACAGGTTATGTTTTAAATGCGACTATATCTTTATACATACATTGTACTTTGATCGAAAGAGAAGATGGAAAAATCA TTTTTGATTCGCCTGATACAAATTCTTACTCTGAGTACGAAAGCAAAGAATTCTTAGAAAATGATGGAAAATTAGATATT TTTAAAAGCATTTACAATCGCATTGTAAAAGATTTTACAAAAAAACCTTTGAGTTTTTCTTTGCATACTTATTCGGATGT ACCAAGTGGTAGTGGCTTGGGCGGAAGCTCAACCTTAGTTGTAGGTGTTATAAAAGCTTTTTCAGAATGGCTTAATTTAC CTTTAGGGGAATATGAAATCGCTAAGCTTGCTTATGAGATAGAAAGAGAAGATTTAGGCATAGTAGGCGGAGCACAAGAT CAATACGCTGCAACTTTTGGCGGCTTTAATTTTATGGAATTTTATAACAATAAAAGAGTCATTGTTAATCCTTTGCGTAT AAAAAACTGGATTGCAAGTGAGCTTGAAACTAGAATTGTGCTTTATTTTACAAATATCACAAGAGAAGCAAAAGATATAG AAGAACATAAAAAAGGAAAACTTGGAGATGAAAAATCTCTCGAAGCTATGCACGCCATAAAGCAAGATGCAATAAAGATG AAAGAAGCTTTGTTTAAGGCGGATTTTGATACTTTGGCGAAAATTTTAGGAAAATCTTGGCAGTCAAAAAAAATCATTTC TGAAATTGTTAGTAATGATGAGCTTGAAAGAATTTATAAACTAGCTATAGATAATGGAGCTTATAGTGGCAAAACCAGTG GAGCAGGAGCAGGTGGATTTATGTTTTTCTTTGTAGATCCTACTAAAAAATACAACCTAATCAAAGCTTTAAGTAAAGAG CAAGGTTATGTGCAAGATTTTTCATTTACAAAAGAGGGGGTTAAATCATGGAGAATTTAA
Upstream 100 bases:
>100_bases TTATTAACTGGAAGCCAGAAATTGCAGCTAGAAAAATGTTTGAAGATTTGTTAAATCATTGGAGAGATGAGATAAAAAAA GGAAGGATTCCGTTAAATAG
Downstream 100 bases:
>100_bases ATTCTTATATAAAAGAACATTTTCAAGAATCAATTTTAGTAAAAGAGCAAATTTTAAAAGATGAGAATTTGATAACTCTT ATTAAAAATGCTTCATTAGA
Product: capsular biosynthesis sugar kinase
Products: NA
Alternate protein names: Galactose kinase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLENDGKLDI FKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKM KEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKE QGYVQDFSFTKEGVKSWRI
Sequences:
>Translated_339_residues MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLENDGKLDI FKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKM KEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKE QGYVQDFSFTKEGVKSWRI >Mature_339_residues MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDTNSYSEYESKEFLENDGKLDI FKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLVVGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQD QYAATFGGFNFMEFYNNKRVIVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKM KEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALSKE QGYVQDFSFTKEGVKSWRI
Specific function: Unknown
COG id: COG2605
COG function: function code R; Predicted kinase related to galactokinase and mevalonate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. GalK subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000705 - InterPro: IPR022963 - InterPro: IPR019741 - InterPro: IPR019539 - InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR006206 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF10509 GalKase_gal_bdg; PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.6 [H]
Molecular weight: Translated: 38190; Mature: 38190
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDT CCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCC NSYSEYESKEFLENDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLV CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHH VGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYNNKRV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHHHCCCEE IVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKM EEEHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGF HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE MFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTIRTQTPLRLGLAGGGTDINLYCDKYTGYVLNATISLYIHCTLIEREDGKIIFDSPDT CCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCC NSYSEYESKEFLENDGKLDIFKSIYNRIVKDFTKKPLSFSLHTYSDVPSGSGLGGSSTLV CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHH VGVIKAFSEWLNLPLGEYEIAKLAYEIEREDLGIVGGAQDQYAATFGGFNFMEFYNNKRV HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHCCCHHHHHHCCCEE IVNPLRIKNWIASELETRIVLYFTNITREAKDIEEHKKGKLGDEKSLEAMHAIKQDAIKM EEEHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH KEALFKADFDTLAKILGKSWQSKKIISEIVSNDELERIYKLAIDNGAYSGKTSGAGAGGF HHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCEE MFFFVDPTKKYNLIKALSKEQGYVQDFSFTKEGVKSWRI EEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA