| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57238457
Identifier: 57238457
GI number: 57238457
Start: 1510144
End: 1510737
Strand: Reverse
Name: 57238457
Synonym: CJE1607
Alternate gene names: NA
Gene position: 1510737-1510144 (Counterclockwise)
Preceding gene: 57238458
Following gene: 57238456
Centisome position: 84.98
GC content: 25.25
Gene sequence:
>594_bases ATGATATTTTTACATCGTCAAAATAATTTAGACTTATCTATTGAAGGTTATGGTATAGAAATTGATTTAAGGTATAATCA AAAATTAGTATTAAACCATGATCTATTAGAAAAAAATTCTCTATATCCTTTTTTTAAAGAAAAAATTCAATTTATGAAAA ATATCCCTATAATTTGTAACGTGAAAGAATCGGGACTAGAAGAAAAAATTATAGAATTGCTCAGTGATGATTTTGAGTAT TATTTTTTAGACTCTCAGATTCCAGATATTTTGAGATTATCAAAAAATGGATATCAAGGTAAATTTATCATTAGAATTTC AGATGTAGAATCTTATAATGAAAAACTTATGGATATTAGTAAGCCTAAATATGTATGGGTGGATTATTCACAATTTTCTA GTTTTAATATTAAAGATTATCAAGAATTTATTTATAATATCAAACCAAAGTTAGGACAAGTTGAACCTATATTGGTTTCT CCTGAGTTATATGATCGATCATATGCAGAACTTATAAAACCTATTCAAAGTATTCTGCCAAAAGGATTTTCTGTGTGTAC TAAAAAGCCTGAGTTATGGAGTATGTATGTTTAA
Upstream 100 bases:
>100_bases TTTTTACAAGAAAATTATGAAAAACTAAAAGCTAAAGCTCATATTTTTGATAATTATTTTATAGATATTGGCGTACCTGG GGATTATGGGAGATTTATGA
Downstream 100 bases:
>100_bases TTTTAAAAAAATAGCTGAAAAATATAAACTTATTATGGTTGATATTGATAATACTTTGTTTAATTATACATTTGCACATA AAAATGCTTTAGAAGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPFFKEKIQFMKNIPIICNVKESGLEEKIIELLSDDFEY YFLDSQIPDILRLSKNGYQGKFIIRISDVESYNEKLMDISKPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVS PELYDRSYAELIKPIQSILPKGFSVCTKKPELWSMYV
Sequences:
>Translated_197_residues MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPFFKEKIQFMKNIPIICNVKESGLEEKIIELLSDDFEY YFLDSQIPDILRLSKNGYQGKFIIRISDVESYNEKLMDISKPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVS PELYDRSYAELIKPIQSILPKGFSVCTKKPELWSMYV >Mature_197_residues MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPFFKEKIQFMKNIPIICNVKESGLEEKIIELLSDDFEY YFLDSQIPDILRLSKNGYQGKFIIRISDVESYNEKLMDISKPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVS PELYDRSYAELIKPIQSILPKGFSVCTKKPELWSMYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23378; Mature: 23378
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPFFKEKIQFMKNIPIICN CEEEEECCCCEEEEEEEEEEEEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHCCCEEEE VKESGLEEKIIELLSDDFEYYFLDSQIPDILRLSKNGYQGKFIIRISDVESYNEKLMDIS CCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCC KPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVSPELYDRSYAELIKPIQSILP CCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCC KGFSVCTKKPELWSMYV CCHHHHCCCCCCEEECC >Mature Secondary Structure MIFLHRQNNLDLSIEGYGIEIDLRYNQKLVLNHDLLEKNSLYPFFKEKIQFMKNIPIICN CEEEEECCCCEEEEEEEEEEEEEEECCEEEEECCHHCCCCCCHHHHHHHHHHHCCCEEEE VKESGLEEKIIELLSDDFEYYFLDSQIPDILRLSKNGYQGKFIIRISDVESYNEKLMDIS CCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHCCC KPKYVWVDYSQFSSFNIKDYQEFIYNIKPKLGQVEPILVSPELYDRSYAELIKPIQSILP CCCEEEEEHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEECCHHHCCHHHHHHHHHHHHCC KGFSVCTKKPELWSMYV CCHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA