| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is fldA [H]
Identifier: 57238425
GI number: 57238425
Start: 1475331
End: 1475822
Strand: Reverse
Name: fldA [H]
Synonym: CJE1573
Alternate gene names: 57238425
Gene position: 1475822-1475331 (Counterclockwise)
Preceding gene: 57238426
Following gene: 57238420
Centisome position: 83.01
GC content: 35.98
Gene sequence:
>492_bases ATGTCAGTAGCAGTAATCTATGGTAGTGCTATGGGAAATACAGAAGGAGCGGCTAATACAATTGCTTCAAAACTTGGAAT TAGCGATGTTTTTAATATCTCAGATATTGATGCGGCTAAAATGAATTCTTACGATAAATTAATTTGTGGAACTTCAACTT GGGGAAGTGGTGATTTACAAGATGATTGGGATGGTTTTGATTTTTCAGGGCTTAGTCTCGGTGGAAAAACCGTAGCTGTA TTTGGTATGGGTGATAGTGAAAGTTATTCTGATACTTTTTGTGGTGGCATGGGTAAATTAGCTCAAAATTTAAAAGATGC AGGCGCAAATTTGGTAGGAGAAGTTTCAACTGATGGTTATACATTTGAAGCAAGTGATGCGGTTGTAGATGGTAAATTTG TTGGACTTGCTCTTGACAATGATAATCAAGAGGATCAAACTGAATCAAGAATTGATGCTTGGATAGAACAAATCAAACCT TATTTTGCTTAA
Upstream 100 bases:
>100_bases CACATTTTATTGAAATAAAACATTTTTTGTGTGATTTAAACAAAACTATGTTAAAATTAGTTCCGTATAAAATATCAAAT CAAATTATAAGGAGAAAATA
Downstream 100 bases:
>100_bases TAATTCTTAAAATCAAGAGTTTTTATACTCTTGATTGTCTTTTCTTAAAAATAAAAAAAACTCACTATTTGATTTATAAT TTTATTTTCTAAAGATAATT
Product: flavodoxin FldA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAV FGMGDSESYSDTFCGGMGKLAQNLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKP YFA
Sequences:
>Translated_163_residues MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAV FGMGDSESYSDTFCGGMGKLAQNLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKP YFA >Mature_162_residues SVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQDDWDGFDFSGLSLGGKTVAVF GMGDSESYSDTFCGGMGKLAQNLKDAGANLVGEVSTDGYTFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKPY FA
Specific function: Low-potential electron donor to a number of redox enzymes [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1786900, Length=159, Percent_Identity=39.622641509434, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI1789262, Length=164, Percent_Identity=39.0243902439024, Blast_Score=110, Evalue=3e-26,
Paralogues:
None
Copy number: 242 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 17135; Mature: 17004
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQ CEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCC DDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQNLKDAGANLVGEVSTDGY CCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEECCCCE TFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKPYFA EEECCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SVAVIYGSAMGNTEGAANTIASKLGISDVFNISDIDAAKMNSYDKLICGTSTWGSGDLQ EEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCC DDWDGFDFSGLSLGGKTVAVFGMGDSESYSDTFCGGMGKLAQNLKDAGANLVGEVSTDGY CCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHHCCHHHHHHHHHHCCCCEEEEECCCCE TFEASDAVVDGKFVGLALDNDNQEDQTESRIDAWIEQIKPYFA EEECCCEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1527503 [H]