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The map label for this gene is yggV [C]

Identifier: 57238418

GI number: 57238418

Start: 1467050

End: 1467652

Strand: Reverse

Name: yggV [C]

Synonym: CJE1566

Alternate gene names: 57238418

Gene position: 1467652-1467050 (Counterclockwise)

Preceding gene: 57238420

Following gene: 57238411

Centisome position: 82.55

GC content: 31.34

Gene sequence:

>603_bases
ATGAAGATTATCCTAGCTACGAGCAATAAACATAAAGTTTTAGAACTTAAAGAAATTTTAAAAGATTTTGAAATTTATGC
TTTTGATGAAGTTTTAATGCCTTTTGAGATTGAAGAAAATGGAAAAACTTTTAAAGAAAACGCCTTGATTAAAGCAAGAG
CGGTTTTTAATGCTTTGGATGAAAAGCAAAAAAAAGATTTTATCGCTTTAAGTGATGATAGTGGCATTTGTGTAGATGTT
TTAGAAGGAAATCCAGGAATTTATTCTGCTCGATTTAGCGGTAAGGGCGATGATAAAAGTAACCGTGATAAACTTGTCAA
TGAAATGATAAAAAAAGGTTTTAAACAAAGTAAGGCGCATTATGTTGCTGCTATTGCTATGGTAGGTTTGATGGGGGAAT
TTAGTACGCATGGAACCATGCATGGAAAAGTAATAGATACAGAAAAAGGTGAAAATGGTTTTGGTTATGATAGCCTTTTT
ATTCCAAAGGGTTTTGATAAAACCTTAGCCCAACTTAGCGTGGATGAGAAGAATAATATCTCTCATCGTTTTAAAGCTTT
AGAGCTTGCAAAAATCATTTTAAAGATTTTAAATAAAGGATAA

Upstream 100 bases:

>100_bases
TGATTAACATCGTTTTATCATTTGATATTTAAAAGCTACGCACAAGGATAAATTTTATAAAATCATATTTTTGTTTTGAT
ATTATTTTGGAGCTTTTGTT

Downstream 100 bases:

>100_bases
AAATGAAAAATTTTTTAAAATATATAGCTATTATTGTTTTAATATATGCTCTTTATGTTGGTTTGGAAACTTGGTTTTCT
TAGAATAAATAGTGATTAAA

Product: deoxyribonucleotide triphosphate pyrophosphatase

Products: NA

Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFKQSKAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG

Sequences:

>Translated_200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFKQSKAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG
>Mature_200_residues
MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTFKENALIKARAVFNALDEKQKKDFIALSDDSGICVDV
LEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFKQSKAHYVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLF
IPKGFDKTLAQLSVDEKNNISHRFKALELAKIILKILNKG

Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]

COG id: COG0127

COG function: function code F; Xanthosine triphosphate pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAM1 NTPase family [H]

Homologues:

Organism=Escherichia coli, GI1789324, Length=210, Percent_Identity=38.5714285714286, Blast_Score=112, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17556833, Length=193, Percent_Identity=30.5699481865285, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002637
- InterPro:   IPR020922 [H]

Pfam domain/function: PF01725 Ham1p_like [H]

EC number: =3.6.1.15 [H]

Molecular weight: Translated: 22349; Mature: 22349

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTFKENALIKARAVFNALD
CEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHH
EKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFKQSKAH
HHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
YVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLFIPKGFDKTLAQLSVDEKNNI
HHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCH
SHRFKALELAKIILKILNKG
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIILATSNKHKVLELKEILKDFEIYAFDEVLMPFEIEENGKTFKENALIKARAVFNALD
CEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCEEECCCCCEEHHHHHHHHHHHHHHHH
EKQKKDFIALSDDSGICVDVLEGNPGIYSARFSGKGDDKSNRDKLVNEMIKKGFKQSKAH
HHHCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
YVAAIAMVGLMGEFSTHGTMHGKVIDTEKGENGFGYDSLFIPKGFDKTLAQLSVDEKNNI
HHHHHHHHHHHHCCCCCCEECCEEEECCCCCCCCCCCCEECCCCHHHHHHHHCCCCCCCH
SHRFKALELAKIILKILNKG
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA