| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238368
Identifier: 57238368
GI number: 57238368
Start: 1401602
End: 1402738
Strand: Reverse
Name: 57238368
Synonym: CJE1511
Alternate gene names: NA
Gene position: 1402738-1401602 (Counterclockwise)
Preceding gene: 57238729
Following gene: 57238367
Centisome position: 78.9
GC content: 33.77
Gene sequence:
>1137_bases ATGAAATTTTGTAAAAAATGTGTGATGCCAGATACTAAGCCTGATTTACATTTTGATGAAGAAGGTGTTTGTGATGCTTG CCGTTCTCAAGAAGTTAAAAATCAAAATATTAATTGGCAAGAAAGAGAAAAAGAATTTTTTGAGCTTATAAAAAAATACA AAAAACATCCTGTTTATGATTGTGTTATCGGAGTAAGCGGCGGAAAAGATTCTACTTTTCAAGTGGTTAAAATGCTTGAA CTTGGACTTAATCCTTTGTGTGTGTGTTTTGAGCCTAGCGTACCTACAAAAATAGGGCGCAAAAATTTAGACAATTTAAA TCATCTTGGCGTGGATTTGATCCATATCAAGCGTGATCCAAAAGTTTATCAAAAACTTGCCCGTGAAGCTTTTATAAGAA CAGGGGATAATGAGTGGCAAAACCATTTGGGAATTTTTACTTCTGTTCCACGCATAGCGGTAAATTTTGGAGTGCCTTTG ATCATCTGGGGAGAAAGTCCGCAGATAGAGTATGGCGGTCCTGCGAGTAGTAAAAATAAAAATATTTTAGGCAGAGAGTG GCTTGAAGAATTTGGCGGGCTTTTAGGAAATCGCGCTTCTGATATGCTTGGGGTAAATGGTATCACTGAAAAAGATTTGT TTTTATATACTTATCCAAGCGATGAAGAACTTCAAAGAGTAGGGGTTACGGGGCTATTTTTAGGGTATTATTTTAAATGG GATTATAAAAAAATTCTTGAAATTTCTAAAAAATATGGTTTTTTAACTCTAGATCATCCTGTTGAGACTACTTATGAAAA TTTTGAAAATTTAGATTGTTATTCTAATCATGTGCATGATTATTTAAAATACTGCAAATACGGCTTTGGTAGAGCAACGG ATAATGCTTGTTTGGATATTCGTTTAGGTTATATCAGCCGTGAAGAAGGGGTGCGTTTGGCACAAAAATACGATGGCAAG CCCCCTAAAAAGGCTATTAAAAAATACCTTGAATTCAGTGGTTTTAGCGAGGAAGAATTTCAAAAAATAGTAGATTCTTT TACCAATAAAAAAATTTTTAAACGTGATGAAAATGGTAAATTTATAAGAGATTATGATGGTTCTTTGGTAAGAAAAGACG AGTGTGTTTTAAAATGA
Upstream 100 bases:
>100_bases TCATTCATTTTTTAATTTTGATATAATATAAATATATAAAATCATAAAATAAAATTTAATTATAACGATATATATATTTA AGACTAATTAAAGGAAATTT
Downstream 100 bases:
>100_bases TAGCGCTCATTGATTACAAGGCGGGAAATTTAAACTCTGTTGCTAAGGCTTTTGAAAAAATAGGAGCTATAAATTTCATA GCTAAAAATCCAAAAGATTT
Product: flagellin modification protein, PseA
Products: NA
Alternate protein names: N-Acetyl Sugar Amidotransferase; LPS Biosynthesis Protein; Putitive LPS Biosynthesis Protein; Flagellin Protein PseA; N-Acetyl Sugar Amidotransferase Subfamily; Pseudaminic Acid Biosynthesis Protein PseA; ATPase; Lipopolysaccharide Biosynthesis Protein; Cell Cycle Control ATPase; Polysaccharide Biosynthesis Protein; LPS Biosynthesis Protein PseA-Like Protein; ATPAse Of LPS Biosynthesis
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREKEFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLE LGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKW DYKKILEISKKYGFLTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQKYDGK PPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK
Sequences:
>Translated_378_residues MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREKEFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLE LGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKW DYKKILEISKKYGFLTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQKYDGK PPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK >Mature_378_residues MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREKEFFELIKKYKKHPVYDCVIGVSGGKDSTFQVVKMLE LGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRDPKVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPL IIWGESPQIEYGGPASSKNKNILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKW DYKKILEISKKYGFLTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNACLDIRLGYISREEGVRLAQKYDGK PPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGKFIRDYDGSLVRKDECVLK
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43716; Mature: 43716
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREKEFFELIKKYKKHPVYD CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEE CVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRDP EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHCCEEEEEECCCH KVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPLIIWGESPQIEYGGPASSKNK HHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHEEECCCEEEEECCCCCCCCCCCCCCCCC NILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKW CCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHCC DYKKILEISKKYGFLTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNACLDI CHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RLGYISREEGVRLAQKYDGKPPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGK EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCCC FIRDYDGSLVRKDECVLK EEEECCCCEEECCCCCCC >Mature Secondary Structure MKFCKKCVMPDTKPDLHFDEEGVCDACRSQEVKNQNINWQEREKEFFELIKKYKKHPVYD CCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEE CVIGVSGGKDSTFQVVKMLELGLNPLCVCFEPSVPTKIGRKNLDNLNHLGVDLIHIKRDP EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHCCEEEEEECCCH KVYQKLAREAFIRTGDNEWQNHLGIFTSVPRIAVNFGVPLIIWGESPQIEYGGPASSKNK HHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHEEECCCEEEEECCCCCCCCCCCCCCCCC NILGREWLEEFGGLLGNRASDMLGVNGITEKDLFLYTYPSDEELQRVGVTGLFLGYYFKW CCHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHCC DYKKILEISKKYGFLTLDHPVETTYENFENLDCYSNHVHDYLKYCKYGFGRATDNACLDI CHHHHHHHHHHCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE RLGYISREEGVRLAQKYDGKPPKKAIKKYLEFSGFSEEEFQKIVDSFTNKKIFKRDENGK EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCCC FIRDYDGSLVRKDECVLK EEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA