Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is 57238247

Identifier: 57238247

GI number: 57238247

Start: 593394

End: 594347

Strand: Direct

Name: 57238247

Synonym: CJE0657

Alternate gene names: NA

Gene position: 593394-594347 (Clockwise)

Preceding gene: 57238248

Following gene: 57238246

Centisome position: 33.38

GC content: 31.45

Gene sequence:

>954_bases
ATGATAAGTCTTGATTTGCTTTATTATATTGTAGGAATTTTATTTTTAGTTTTTGGAATTTTAAGTTTTTCTAATCAAGC
TAAAGATATAAAATCAAGAATAAGCGGCGGGGTATTCTGGATAAGTTATAGTTTTACTTTTTTACTAGCAGGAGTTTTGC
CTCATTTTGTGATGGGTTGTATAGTGATTTTACTAGCACTTATAGCAGGATTTAATTTATTAAAACCAGCAAAGATTGAA
GTTAGCAAAGAAGAAAAAGAATACGAGATAAAACATGCAAATATTTATAAAAATAAACTTTTTATTCCTGCTTTAATAGT
TCCTTTGATTACACTTATTGGGACTTTTTTATTTCCCTATTTGAGTTTTTTTGAAAATAAAAATGCTACATTGATGGCTT
TGATTATAGGTATAATTATTTCTTCAGTAGTTGCTTGTTTTATGTTTAAGGCTTCTCCTAAAAGAGCTGTTAAAGATGCA
GCACATACTATGGATCACATTAGTTGGGCAGCGCTTTTACCGCAAATTTTGGCTACACTTGGGGTAGTTTTTGTTTCTAC
AGGAATGGGCGATCAAGTATCTAAACTTTTATCTAGTTATATTAGTTTAGATAATGCTTTTATTGCAGTAGCTGTGTATT
GTATCGCTATGGCGCTTTTTACTATAGTAATGGGCAATGCTTTTGCAGCTTTTCCTGTGATTACTGCTGCTATTGCTTTG
CCGATTTTAATCATACAAATGCATGCAAATCCTGCTATTATAGGAGCGATTGGAATGCTTAGTGGATTTTGCGGAACTTT
AATGACGCCTATGGCTGCAAATTTTAATATAGTTCCTGCGGCACTTTTAAATTTGGATGATAAAAATGGCGTAATTAAAG
CCCAGTTTATGTCAGGACTTGTTTTGCTTGTGGCTAATATCTTTTTAATGTATTTTTTAGCTTTTAGATTTTAA

Upstream 100 bases:

>100_bases
GTTTGGGCTATACCAACTGGAATTTTGGCTTTAATTATCCATTGTTCTAGACTTTATTTATTTGATAAAAGATTAGAAAA
AACTTATAAAGGGTTGAGTG

Downstream 100 bases:

>100_bases
GGAGAAACAATGGAAAAATTTATAAAACAATTTAGCTTTATTGCACTAGAAAATATTTTTAGAGAATTGCCAAATAAAAT
TACACATTCTTTTAATGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE
VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL
PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF

Sequences:

>Translated_317_residues
MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE
VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL
PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF
>Mature_317_residues
MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGCIVILLALIAGFNLLKPAKIE
VSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPYLSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDA
AHTMDHISWAALLPQILATLGVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL
PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGLVLLVANIFLMYFLAFRF

Specific function: Unknown

COG id: COG3817

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34471; Mature: 34471

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGC
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
IVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPY
HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDAAHTMDHISWAALLPQILATL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHH
VLLVANIFLMYFLAFRF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISLDLLYYIVGILFLVFGILSFSNQAKDIKSRISGGVFWISYSFTFLLAGVLPHFVMGC
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
IVILLALIAGFNLLKPAKIEVSKEEKEYEIKHANIYKNKLFIPALIVPLITLIGTFLFPY
HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFFENKNATLMALIIGIIISSVVACFMFKASPKRAVKDAAHTMDHISWAALLPQILATL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVVFVSTGMGDQVSKLLSSYISLDNAFIAVAVYCIAMALFTIVMGNAFAAFPVITAAIAL
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
PILIIQMHANPAIIGAIGMLSGFCGTLMTPMAANFNIVPAALLNLDDKNGVIKAQFMSGL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHHHH
VLLVANIFLMYFLAFRF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA