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The map label for this gene is 57238220

Identifier: 57238220

GI number: 57238220

Start: 619930

End: 620529

Strand: Direct

Name: 57238220

Synonym: CJE0687

Alternate gene names: NA

Gene position: 619930-620529 (Clockwise)

Preceding gene: 57238221

Following gene: 57238219

Centisome position: 34.87

GC content: 25.67

Gene sequence:

>600_bases
TTGTTTATTAGTAAGATTATTATCAGCGAAGATTTTTTAGGTATTAAAGAAGAAATGATTAATAATTTTGGTATTAAAAA
ATTAAGATTTTTTATGCCACAAAATGAATTTTTACTTGATGATGCAAGAGCGGTTGAAAAAGAAAGCTATATTGCAGAAA
CTGAAGAAAAAATTATTGTTTTAATGGCGGATTCTTATAGGATAGAAGCACAAAATTTTTTACTTAAACTTCTTGAAGAG
CCTCCAAAAAATATTAAATTTCTTATTGTGGTACCTTCTAAAAATTTACTTTTACCTACCATAAAATCGCGTCTTATTTG
CGAAAAAAGAAAAGTTGAAAAGGAAGTTAAAAAACTTGATTTAGATCTTAAAAGAATGGATTTAAGAATGCTTTTTGATT
TTTTGCAAAAAAATGAAAATTTGGATAAAAATGAACTTATGGATCAAATCGCATTACTTGCTAAAGAATGTGTGAAATAT
AAAGATTTTAATGCTGAAGAATTAGAGTTTTTTTATGAAGGCTATGAGCTTGCAAAATTAAATTCTAAAAGCGGGGTGCT
TTTAGCTACTCTTTTGTTAAATTACTATACAAAGAAATAA

Upstream 100 bases:

>100_bases
AAGATAAAGACTTGGATATCAAGCTTATTAGTTTATATCAACTTTTTGATGTAAGTTTGGATGCAATATTATTTTCCAAG
GTGCAATTAGGATAAATATT

Downstream 100 bases:

>100_bases
AATGAAATTTTTTAAAATCAATCCAAATACCGATTTTAATTTGCTTTGTTCTTTCATAAATCCCCATAAAATGGGACAAA
AAATTATGAGTGAAAAAACA

Product: DNA polymerase III subunit delta'

Products: NA

Alternate protein names: DNA Polymerase III Delta Prime Subunit HolB; DNA Polymerase III Delta Prime Subunit Holb; DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAVEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEE
PPKNIKFLIVVPSKNLLLPTIKSRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
KDFNAEELEFFYEGYELAKLNSKSGVLLATLLLNYYTKK

Sequences:

>Translated_199_residues
MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAVEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEE
PPKNIKFLIVVPSKNLLLPTIKSRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
KDFNAEELEFFYEGYELAKLNSKSGVLLATLLLNYYTKK
>Mature_199_residues
MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAVEKESYIAETEEKIIVLMADSYRIEAQNFLLKLLEE
PPKNIKFLIVVPSKNLLLPTIKSRLICEKRKVEKEVKKLDLDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKY
KDFNAEELEFFYEGYELAKLNSKSGVLLATLLLNYYTKK

Specific function: Unknown

COG id: COG0470

COG function: function code L; ATPase involved in DNA replication

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23492; Mature: 23492

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAVEKESYIAETEEKIIV
CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
LMADSYRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPTIKSRLICEKRKVEKEVKKLD
EEECCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
LDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKYKDFNAEELEFFYEGYELAKL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEE
NSKSGVLLATLLLNYYTKK
CCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MFISKIIISEDFLGIKEEMINNFGIKKLRFFMPQNEFLLDDARAVEKESYIAETEEKIIV
CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEE
LMADSYRIEAQNFLLKLLEEPPKNIKFLIVVPSKNLLLPTIKSRLICEKRKVEKEVKKLD
EEECCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHC
LDLKRMDLRMLFDFLQKNENLDKNELMDQIALLAKECVKYKDFNAEELEFFYEGYELAKL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEE
NSKSGVLLATLLLNYYTKK
CCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA