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The map label for this gene is tlyA [H]

Identifier: 57238216

GI number: 57238216

Start: 624599

End: 625360

Strand: Direct

Name: tlyA [H]

Synonym: CJE0691

Alternate gene names: 57238216

Gene position: 624599-625360 (Clockwise)

Preceding gene: 57238217

Following gene: 57238215

Centisome position: 35.13

GC content: 25.98

Gene sequence:

>762_bases
ATGAGATTTGATTTTTTTGTTTCAAAGCGTTTAAATATCAGTAGAAATAAAGCCTTAGAGCTTATAGAAAATGAAGAGAT
TTTACTTAATGGTAAGAGTTTTAAAGCTTCTTTTGATGTGAAAAATTTTTTAGAAAATTTAAAAAAAACGCAAGATTTAA
ATCCTGAAGATATACTTTTAGCCAATGAGTTAAAATTGGATCTTTTAAGTGAAATTTATGTTTCAAGAGCAGCTTTGAAA
TTAAAAAAATTTTTAGAAGAAAATGATATTGAAATAAAACATAAAAATTGTCTTGATATAGGATCTAGTACGGGCGGTTT
TGTTCAAATTTTACTTGAAAATCAGGCTTTAAAAATCACTGCTCTTGATGTGGGTAGTAATCAACTCCATCCAAGTTTAA
GAGCAAATGAAAAAATTATCTTGCATGAAAATACAGATCTTAGAGCCTTTAAAAGTGAAGAAAAATTTGAACTTGTTACT
TGTGATGTGAGTTTTATTTCTCTTATTAATTTACTTTATTATGTCGATAATTTAGCTTTAAAGGAAATTATTTTACTTTT
TAAACCTCAGTTTGAAGTGGGAAAAAATATCAAAAGAGATAAAAAAGGTGTTTTAAAAGATGACAAGGCAATCTTAAAAG
CAAGAATGGATTTTGAAAAAGAATGTGCTAAGTTAGGTTGGCTTTTAAAAAATACGCAAAAATCAAGCATTAAAGGAAAG
GAAGGTAATGTTGAATATTTTTACTACTATATCAAAAATTAA

Upstream 100 bases:

>100_bases
ATCTTAGAGAAATTTTTAAAAAAAATGCTTTTGAAATAGGTATTTGGTGGTTTTCTAAAGAAAAAGAAGACTTAGAAAAA
AGAATAAATGAGAGTTTAAA

Downstream 100 bases:

>100_bases
TATTACTTCTTTAGCCATAGGTTGTTTTGATGGTATGCATTTAGGACATCTAAAACTTGTAAAATATTTAGATGAGAATG
GGGCTTTGCTAGTTATTAAT

Product: hemolysin A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFLENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALK
LKKFLEENDIEIKHKNCLDIGSSTGGFVQILLENQALKITALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVT
CDVSFISLINLLYYVDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKECAKLGWLLKNTQKSSIKGK
EGNVEYFYYYIKN

Sequences:

>Translated_253_residues
MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFLENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALK
LKKFLEENDIEIKHKNCLDIGSSTGGFVQILLENQALKITALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVT
CDVSFISLINLLYYVDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKECAKLGWLLKNTQKSSIKGK
EGNVEYFYYYIKN
>Mature_253_residues
MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFLENLKKTQDLNPEDILLANELKLDLLSEIYVSRAALK
LKKFLEENDIEIKHKNCLDIGSSTGGFVQILLENQALKITALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVT
CDVSFISLINLLYYVDNLALKEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKECAKLGWLLKNTQKSSIKGK
EGNVEYFYYYIKN

Specific function: Unknown

COG id: COG1189

COG function: function code J; Predicted rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S4 RNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004538
- InterPro:   IPR002877
- InterPro:   IPR002942 [H]

Pfam domain/function: PF01728 FtsJ; PF01479 S4 [H]

EC number: NA

Molecular weight: Translated: 29229; Mature: 29229

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFLENLKKTQDLNPEDILL
CCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHCCCCHHHEEE
ANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGSSTGGFVQILLENQALKIT
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCEEEEEEECCEEEEE
ALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVTCDVSFISLINLLYYVDNLAL
EEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHH
KEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKECAKLGWLLKNTQKSSIKGK
HHHHHHCCCCHHHCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
EGNVEYFYYYIKN
CCCEEEEEEEEEC
>Mature Secondary Structure
MRFDFFVSKRLNISRNKALELIENEEILLNGKSFKASFDVKNFLENLKKTQDLNPEDILL
CCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCEECCCHHHHHHHHHHHCCCCHHHEEE
ANELKLDLLSEIYVSRAALKLKKFLEENDIEIKHKNCLDIGSSTGGFVQILLENQALKIT
ECHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEECCCCCCCEEEEEEECCEEEEE
ALDVGSNQLHPSLRANEKIILHENTDLRAFKSEEKFELVTCDVSFISLINLLYYVDNLAL
EEECCCCCCCCCCCCCCEEEEECCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHHHHHH
KEIILLFKPQFEVGKNIKRDKKGVLKDDKAILKARMDFEKECAKLGWLLKNTQKSSIKGK
HHHHHHCCCCHHHCCCCCHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
EGNVEYFYYYIKN
CCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 2507400 [H]