| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yicG [C]
Identifier: 57238211
GI number: 57238211
Start: 627577
End: 628209
Strand: Reverse
Name: yicG [C]
Synonym: CJE0696
Alternate gene names: 57238211
Gene position: 628209-627577 (Counterclockwise)
Preceding gene: 57238210
Following gene: 57238212
Centisome position: 35.34
GC content: 35.55
Gene sequence:
>633_bases ATGGAGATAAATGCTCTTACGATAACCACTCTTTATATCATAGGTATTTCCGCAGAAGGAATGACAGGAGCTTTAGCTGC AGGACGCCACAAAATGGATCTTTTTGGAGTTATTTTTATTGCTCTCGTAACAGCAATTGGAGGCGGAAGCATACGAGATG TGCTTTTAGGACATTATCCTTTAACTTGGGTTAAACATCCTGAATATATTATTTTAATCTGTTTTTGCGCCCTTGTAGCC ACAAAAATTCCGCGCGTAGTAACCAAACTTGAAACTTTATTTCTAACTCTTGATGCTATAGGACTTGTTGTTTTTAGCAT ACTTGGAGCTCAAATAGCTATAGATCAAAACCATGGCTTTATCATAGCCGTTGCTGCCGCTGTAATTACCGGTGTTTTTG GTGGAATTTTAAGAGATATTTTATGTATGAGAATCCCCTTGGTGTTTCAAAAAGAAATTTATGCAGGAATTGCCATAATT GCAGGAGCAATCTATTATTCTCTAATAATTTGGCTTGAGCTTAATGCCCTAGTTTGCACACTTTTAACTCTTTTTATAGG AGTTTTTGCAAGGCTTTTAGCTATCAAATATCAATGGTCTTTACCTATTTTTTCTTACAATGAAGAAAAATAA
Upstream 100 bases:
>100_bases CCGAAATTTAAAGAATGCTATCAAGCACCAAACCACGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTGA TAAATTTTAAGGTATAAATT
Downstream 100 bases:
>100_bases TTTATCGTTGCTTTATACAAGTTTGCTAAGATATTAAAAATTTTAGGAGATTGATAAATGCGAAGACTAAGTATTTTACT TGCAATTTTAATAGTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK
Sequences:
>Translated_210_residues MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK >Mature_210_residues MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTAIGGGSIRDVLLGHYPLTWVKHPEYIILICFCALVA TKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGFIIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAII AGAIYYSLIIWLELNALVCTLLTLFIGVFARLLAIKYQWSLPIFSYNEEK
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family
Homologues:
Organism=Escherichia coli, GI87082304, Length=199, Percent_Identity=58.7939698492462, Blast_Score=221, Evalue=3e-59, Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=38.7254901960784, Blast_Score=117, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y593_CAMJE (Q9PHS3)
Other databases:
- EMBL: AL111168 - PIR: H81406 - RefSeq: YP_002344023.1 - IntAct: Q9PHS3 - GeneID: 904918 - GenomeReviews: AL111168_GR - KEGG: cje:Cj0593c - HOGENOM: HBG610998 - OMA: MPKFDYQ - PhylomeDB: Q9PHS3 - ProtClustDB: CLSK878847 - BioCyc: CJEJ192222:CJ0593C-MONOMER - InterPro: IPR005115
Pfam domain/function: PF03458 UPF0126
EC number: NA
Molecular weight: Translated: 22886; Mature: 22886
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xd349a10)-; HASH(0xd620e34)-; HASH(0xc6d7604)-; HASH(0xb8cc428)-; HASH(0xc3a6470)-; HASH(0xb28ebcc)-;
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTAIGGGSIRDVLLGHYP CCCCCEEEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC LTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC IIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIIAGAIYYSLIIWLELNALVCT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLFIGVFARLLAIKYQWSLPIFSYNEEK HHHHHHHHHHHHHHHHHEECCCEECCCCCH >Mature Secondary Structure MEINALTITTLYIIGISAEGMTGALAAGRHKMDLFGVIFIALVTAIGGGSIRDVLLGHYP CCCCCEEEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC LTWVKHPEYIILICFCALVATKIPRVVTKLETLFLTLDAIGLVVFSILGAQIAIDQNHGF EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC IIAVAAAVITGVFGGILRDILCMRIPLVFQKEIYAGIAIIAGAIYYSLIIWLELNALVCT HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLTLFIGVFARLLAIKYQWSLPIFSYNEEK HHHHHHHHHHHHHHHHHEECCCEECCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204