| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238185
Identifier: 57238185
GI number: 57238185
Start: 655964
End: 656626
Strand: Direct
Name: 57238185
Synonym: CJE0723
Alternate gene names: NA
Gene position: 655964-656626 (Clockwise)
Preceding gene: 57238186
Following gene: 57238184
Centisome position: 36.9
GC content: 24.13
Gene sequence:
>663_bases ATGGAAAAGCAAAAAATGGCAAGGCAAAGCTCTAGTTTAAAATCATTTATTTATAAAGATGAGTGCTATTTTTATTCTAA AAAACGCATAAAAACTTTAAGATTAAGGCTCAATGAAAGGGGTGAATTTGTTCTTAGCATTCCTTATTTTTGCACCTTTA AAAGTGTTTATGAGTTTTTAGATAAATCAAGTTCTTGGATGAATGAGGCAAAAAAAAGATTTGAAAAAAAAGCCTTAAAG GATGATGAGTTAATTTTTTTAGCTAAAAAATATAAAATTATTTTTGATGAAAATGTCAAAAAAACTTATTTTGATAAAGA TAAAATAATTTGTCAAAATAAAGCAAAATTAGATTTATTTTTAAGACAAAATGCTAAAAAGATTTTTACTTTTTATCTTA AAAAATGGAGTAAAAAAACAGGTTTATTTTATACGCATTTAAGCATTAAAAATATGAAAACGCGTTGGGGTTCTTGCAAT CATAATAAAGCTTATATTAATTTAAATTTAAAACTCATTCAAAAGAGTTTAAATGCTATTGAATATGTGGTTTTGCATGA AATAAGCCACTTAAAATTCCCCAATCACAGCAAAGAATTTTATACTTTTATAGAGCATTTTATGAGTGATTTTAGGCAAA GAGAGAAAGAATTTTTAAGTTAA
Upstream 100 bases:
>100_bases TGGGTTATGTGCTTTGTTTTCATTTTAATCTTGGAATTTTAGGGGTTTGGATAGGATTTTGTGCAGATGAGTTTTTGCGT GGAATGGTAAATTCATACAG
Downstream 100 bases:
>100_bases AAATGTTATATTTATAGTTTATTTTTCAAAAAAGGCATAATATGACTTTGGATTTTGATTTTATTTATAATGCAGATAAT GATATTTTTGAATATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Zinc Metallopeptidase; Zinc Metallopeptidase-Like Protein; Peptidase; Protease
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MEKQKMARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYFCTFKSVYEFLDKSSSWMNEAKKRFEKKALK DDELIFLAKKYKIIFDENVKKTYFDKDKIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCN HNKAYINLNLKLIQKSLNAIEYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS
Sequences:
>Translated_220_residues MEKQKMARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYFCTFKSVYEFLDKSSSWMNEAKKRFEKKALK DDELIFLAKKYKIIFDENVKKTYFDKDKIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCN HNKAYINLNLKLIQKSLNAIEYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS >Mature_220_residues MEKQKMARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYFCTFKSVYEFLDKSSSWMNEAKKRFEKKALK DDELIFLAKKYKIIFDENVKKTYFDKDKIICQNKAKLDLFLRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCN HNKAYINLNLKLIQKSLNAIEYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26778; Mature: 26778
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQKMARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYFCTFKSVYEFL CCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHH DKSSSWMNEAKKRFEKKALKDDELIFLAKKYKIIFDENVKKTYFDKDKIICQNKAKLDLF CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHCCCCCEEECCCCHHHHH LRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAYINLNLKLIQKSLNAI HHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHH EYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKQKMARQSSSLKSFIYKDECYFYSKKRIKTLRLRLNERGEFVLSIPYFCTFKSVYEFL CCHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHH DKSSSWMNEAKKRFEKKALKDDELIFLAKKYKIIFDENVKKTYFDKDKIICQNKAKLDLF CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCHHHCCCCCEEECCCCHHHHH LRQNAKKIFTFYLKKWSKKTGLFYTHLSIKNMKTRWGSCNHNKAYINLNLKLIQKSLNAI HHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHH EYVVLHEISHLKFPNHSKEFYTFIEHFMSDFRQREKEFLS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA