| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238123
Identifier: 57238123
GI number: 57238123
Start: 1298866
End: 1300326
Strand: Direct
Name: 57238123
Synonym: CJE1386
Alternate gene names: NA
Gene position: 1298866-1300326 (Clockwise)
Preceding gene: 57238122
Following gene: 57238124
Centisome position: 73.06
GC content: 29.5
Gene sequence:
>1461_bases ATGCATGGAAAAATAGCTATTTATATGGATTCTACAGGACGTGGAACCGTTACAAACTCAGCAAATACCTTTTTTGACTT CAATCGCCAAATTTGGAATGATAAAAAAAGTATGCCAAGTGTTGGTATGCTTGTGGAATTTAGAACTCTTTCTAGCGAAA AAAAAGCAGAAGACGGCAAGCCCGTTCAAACAAGCAAAACCATAACAGGTATAAAACCTTCAAAATTTCAAGAATTTAAA GAAGGGGATTTTATCACTGAGCATGATTTTTGGAAAACTGACAATGATGATGAATTAGAAGACTTGCAAAACTCAAGAAG AAGTGCTTATATAACAGAACTTTATAGAACAACAGACTTTGACACTATAGAAAAAATTCCTCTTTCTTTTACTATACCTC AAGCTATACAAAAATATTTTGCCCATGAAATTTTATCCGTAGAAACGCTTCAAGCCAATCTACAAGATGAAAAGGAAATT CCTTGTATACTTGATTATCTTATACTTAAAAGATTTTTATTTAAAGCTTATGATACTTTAATTTTTATGGATAATAGCAT AGACCAAAACCAATTTAGCGCATTAAAAAGCATCATGATGCATTTAGAGAATTCGTATAAGCAAATGATGGCTGATCAAA AACCAAATATCACTAAAATTTTTAACGAAACTTTTTTATCTTTGCAGTGTCATTACCAAGCTTTAGTAGCCACCATAGAT ACAAGAAAAAATCGTCTAGCCTCACTTGAAGCACAAATGAAAACTTTACAATCTGAAATAAATCTTAAAAGCAATGCGAC CGATGCAGACCCTGAAAAACTTAAAGCACGACAAGAAATATTGGCTAAACTACAAAAAGAAGCAGAATACTACAGAACAA CACTAAAAAGACTTGATGCTATAAGGGAAGATTTTTATAAGAAAAATTACAATATTTTCGAAAATGCTTTTAAACTTTCA CGAGAAAAACTCTTTAAAAAAATTGTCACAGGTTTAAATCTATGTGCAACCATAATGGATGTCAAAATTTGGCACTTATC TTTAAAATCATCAGGGGTTAAAAATTCTTATTTTACTATGAGTAATATAGAAAATTCTTTCTGTTCTCTTTCTTTTGCAG AACATTACTTAAGTCGCTTAAATAAATCCGCTCTAAATCCTTTTGATCAAAAACTTTTAGTGTATATTCAAAAAATCACA AAAGAACAAAGAAAAAAATTTTTAGTTGTCACATCGGATTTAGATTTATTATGCAAATTAAAAATTGAAAACTTTTCACA AAATCCGTATTATTTAGTAAAATACGCACCTAAAAAAGTAAATTATCAATCTTTAATGCGTGATAACACCTTTGATATAG TCTATATTGATGAAAAACATGTTTGGGAAAATGTTGCCGATATTATTTTACAAGGAAAGCATTTTGACAAATCAGGAAAA ACCAAATTTAAACTGATTTAA
Upstream 100 bases:
>100_bases ATAGAATGGGAATGATCCATTTTTTCTAGCACTTATTTTTATTATAAAATTTTTATAAAAATAAGGCTAGAATTTATTCA AGAAATTTCAAGGAAGAAAT
Downstream 100 bases:
>100_bases GACATAGAAATTTAAGCTAAATTAAGTTATAATTTCCTTGCCTAAACAGTTTGTAGTATTTAAAGTGATCCAACACATTT TTATTAACTGCGATTGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLVEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFK EGDFITEHDFWKTDNDDELEDLQNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI PCILDYLILKRFLFKAYDTLIFMDNSIDQNQFSALKSIMMHLENSYKQMMADQKPNITKIFNETFLSLQCHYQALVATID TRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKARQEILAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLS REKLFKKIVTGLNLCATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKIT KEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDEKHVWENVADIILQGKHFDKSGK TKFKLI
Sequences:
>Translated_486_residues MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLVEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFK EGDFITEHDFWKTDNDDELEDLQNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI PCILDYLILKRFLFKAYDTLIFMDNSIDQNQFSALKSIMMHLENSYKQMMADQKPNITKIFNETFLSLQCHYQALVATID TRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKARQEILAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLS REKLFKKIVTGLNLCATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKIT KEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDEKHVWENVADIILQGKHFDKSGK TKFKLI >Mature_486_residues MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLVEFRTLSSEKKAEDGKPVQTSKTITGIKPSKFQEFK EGDFITEHDFWKTDNDDELEDLQNSRRSAYITELYRTTDFDTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEI PCILDYLILKRFLFKAYDTLIFMDNSIDQNQFSALKSIMMHLENSYKQMMADQKPNITKIFNETFLSLQCHYQALVATID TRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKARQEILAKLQKEAEYYRTTLKRLDAIREDFYKKNYNIFENAFKLS REKLFKKIVTGLNLCATIMDVKIWHLSLKSSGVKNSYFTMSNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKIT KEQRKKFLVVTSDLDLLCKLKIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDEKHVWENVADIILQGKHFDKSGK TKFKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56788; Mature: 56788
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLVEFRTLSSEKKAEDGK CCCEEEEEECCCCCCEECCCCCHHHHCCHHHHCCCCCCCCCCCEEEEHHHCCHHCCCCCC PVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDLQNSRRSAYITELYRTTDF CCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEIPCILDYLILKRFLFKAYDTL CHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHE IFMDNSIDQNQFSALKSIMMHLENSYKQMMADQKPNITKIFNETFLSLQCHYQALVATID EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKARQEILAKLQKEAEYYRTTLKRLDA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IREDFYKKNYNIFENAFKLSREKLFKKIVTGLNLCATIMDVKIWHLSLKSSGVKNSYFTM HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEH SNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKITKEQRKKFLVVTSDLDLLCKL HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE KIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDEKHVWENVADIILQGKHFDKSGK EECCCCCCCEEEEEECCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCC TKFKLI EEEEEC >Mature Secondary Structure MHGKIAIYMDSTGRGTVTNSANTFFDFNRQIWNDKKSMPSVGMLVEFRTLSSEKKAEDGK CCCEEEEEECCCCCCEECCCCCHHHHCCHHHHCCCCCCCCCCCEEEEHHHCCHHCCCCCC PVQTSKTITGIKPSKFQEFKEGDFITEHDFWKTDNDDELEDLQNSRRSAYITELYRTTDF CCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DTIEKIPLSFTIPQAIQKYFAHEILSVETLQANLQDEKEIPCILDYLILKRFLFKAYDTL CHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHE IFMDNSIDQNQFSALKSIMMHLENSYKQMMADQKPNITKIFNETFLSLQCHYQALVATID EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TRKNRLASLEAQMKTLQSEINLKSNATDADPEKLKARQEILAKLQKEAEYYRTTLKRLDA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IREDFYKKNYNIFENAFKLSREKLFKKIVTGLNLCATIMDVKIWHLSLKSSGVKNSYFTM HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEH SNIENSFCSLSFAEHYLSRLNKSALNPFDQKLLVYIQKITKEQRKKFLVVTSDLDLLCKL HHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEE KIENFSQNPYYLVKYAPKKVNYQSLMRDNTFDIVYIDEKHVWENVADIILQGKHFDKSGK EECCCCCCCEEEEEECCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCC TKFKLI EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA