| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238108
Identifier: 57238108
GI number: 57238108
Start: 1285397
End: 1286347
Strand: Direct
Name: 57238108
Synonym: CJE1371
Alternate gene names: NA
Gene position: 1285397-1286347 (Clockwise)
Preceding gene: 57238107
Following gene: 57238110
Centisome position: 72.3
GC content: 26.71
Gene sequence:
>951_bases ATGAAATTTAGTGACTTTTTCCATGCTTGGCTCCATGAAAGCTATTATAAAAATGCTGTAAGTATAGGAAAAAACGGAGA TTTTTTTACTGCTGTAAGCGTAGGAAATCTTTTTGGCACACTTTTAGCCAAGCATTTTTTAAATTTAATAGATAAAAAAA TTTTACAACTCCCTTTAGAACTTGTAGAAATAGGCGCTAATGAAGGATATTTAAGTCGTGATTTTTTAGCCGCTTTGCTT GAATTAAGACCTGAAATTTTTTCTCAAATTTCTTTTTTCGTCATAGAGCCGCATGAAAAATTAAGAACTTTACAAAAAAA GACTTTAGAAGGAGTGGAATTTACTCACAAAAATAGTCTTAAAGAATGCCATTTTAAGAACGCTTTTTTCTTTTGCAATG AACTTTTTGATAGTTTTGCTTGCGAACTTATAGATCATGATAAAATGGCATTTGTAGAAAATTTTAAACTTATTTTTAAA AATATGGATGAAAATTTAATCACAAAATGCAAAGCTTTAAATCTTAAAAAAGGTGAACTCAGTTTAGAGCTTGAAAATTT TTTTAAAGATTTAAACCAAACTTGTGAGAGATTTATATTTGCGGGACTTGACTATGGAACTTTAAATCCACAAAGTTTTA GCTTAAGAATCTATCAAAAGCACGAAGTTTTTAGCCCTTTTGAAGTATCTTTAAAAGATTTTTTCGGCAAAAGCGATCTA ACTTATAATGTCAATTTTACTCATCTTCAAAAACTCATCAAAGAATATGATTTTAAACCTTTAGCTTTTAAAAAACAAAG TCTTGCTTTAATGGATTTTGGTTTTGAAGATTTATTAGAATACACAAAAAATAAAAACATTAAAACTTACGAAAGTTTTT TATCTCAAGCTAAAATTTTATTTTTTAATTTTGATGAAAAATTTCATTTTTTCGAATTTCAAAAAAACTAA
Upstream 100 bases:
>100_bases CAGGTAGGGTAAGTGGGCCGCATTTGCATTTTGGAATTTTAGCTGGAGGCAAACAAGTTGATCCTTTGGATTTTGTATCC AAATTTAATGCTATTTTTCA
Downstream 100 bases:
>100_bases AATTTTATATTTTTCATACTCGCTAAACAAACCCCCTCCCTTAAACCCTCATCAATGACTAGAAGTTTATGTTTATCAAA CAAAGCATAAAACAGCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKHFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALL ELRPEIFSQISFFVIEPHEKLRTLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGLDYGTLNPQSFSLRIYQKHEVFSPFEVSLKDFFGKSDL TYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFEDLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN
Sequences:
>Translated_316_residues MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKHFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALL ELRPEIFSQISFFVIEPHEKLRTLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGLDYGTLNPQSFSLRIYQKHEVFSPFEVSLKDFFGKSDL TYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFEDLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN >Mature_316_residues MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKHFLNLIDKKILQLPLELVEIGANEGYLSRDFLAALL ELRPEIFSQISFFVIEPHEKLRTLQKKTLEGVEFTHKNSLKECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFK NMDENLITKCKALNLKKGELSLELENFFKDLNQTCERFIFAGLDYGTLNPQSFSLRIYQKHEVFSPFEVSLKDFFGKSDL TYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFEDLLEYTKNKNIKTYESFLSQAKILFFNFDEKFHFFEFQKN
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37226; Mature: 37226
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKHFLNLIDKKILQLPLE CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLRTLQKKTLEGVEFTHKNSL HHHHCCCCCCCHHHHHHHHHHHCHHHHHCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCH KECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFKNMDENLITKCKALNLKKGEL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE SLELENFFKDLNQTCERFIFAGLDYGTLNPQSFSLRIYQKHEVFSPFEVSLKDFFGKSDL EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCC TYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFEDLLEYTKNKNIKTYESFLSQAKIL EEECCHHHHHHHHHHCCCCCCEECHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCEEE FFNFDEKFHFFEFQKN EEECCCCEEEEEECCC >Mature Secondary Structure MKFSDFFHAWLHESYYKNAVSIGKNGDFFTAVSVGNLFGTLLAKHFLNLIDKKILQLPLE CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHH LVEIGANEGYLSRDFLAALLELRPEIFSQISFFVIEPHEKLRTLQKKTLEGVEFTHKNSL HHHHCCCCCCCHHHHHHHHHHHCHHHHHCCEEEEECCHHHHHHHHHHHHCCCCHHHHCCH KECHFKNAFFFCNELFDSFACELIDHDKMAFVENFKLIFKNMDENLITKCKALNLKKGEL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCE SLELENFFKDLNQTCERFIFAGLDYGTLNPQSFSLRIYQKHEVFSPFEVSLKDFFGKSDL EEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCC TYNVNFTHLQKLIKEYDFKPLAFKKQSLALMDFGFEDLLEYTKNKNIKTYESFLSQAKIL EEECCHHHHHHHHHHCCCCCCEECHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHCCCEEE FFNFDEKFHFFEFQKN EEECCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA