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The map label for this gene is yebA [H]

Identifier: 57238107

GI number: 57238107

Start: 1284579

End: 1285400

Strand: Direct

Name: yebA [H]

Synonym: CJE1370

Alternate gene names: 57238107

Gene position: 1284579-1285400 (Clockwise)

Preceding gene: 57238106

Following gene: 57238108

Centisome position: 72.26

GC content: 30.66

Gene sequence:

>822_bases
ATGAAAGCCTTATGGCTTTTTTTAAGCCTTACTCTTTGGCTTTTTGGAGCTCAAAATTTAGAACTCATCAAAGGTCAAGC
TTTATTTTTGGAGCTAGATAAGAAAGATTTTTTATCTTTAAAAAATAATGGTAAAAATATTCCCACTTTTACACATCCTA
AAAATCAAGAAAAAGTTCTAGCTATTTTTTCCTTACCTTACAAAAATCCCCCGCAAAATACAAAACTTATCGCATTTTAT
AAAGATAAAAAAGAAGAAATTTTCATAAAAACTTTAGAAGGTAATTATAAAAGTGAAAAATTGCAAGTTGAAAACAAAAA
GATTTTTCCACCAAAAACCATACAAGAACGCATCACTAAAGAATTAAAAGAAGCCAATGCGATTTATAGTTCTTATACTC
CAAAAGCTTTATTTAACGGTGCTTTTAATATACCTTTAAATTCTTTTATCACAAGTGATTTTGGCAAAGCAAGAACTTTT
AATGAAAAAGTAGCAAGTTATCATAGCGGAACGGACTTTAGAGCTGCCATAGGAACACCTATTTATGCAGCCAATTCAGG
TGTAGTAAAAATTGCAAAAGATCGTTATTTCGCAGGAAATTCAGTAGTCATTGATCATGGTTTTGGAATTTATTCACAAT
ATTATCATCTTTCTAAAATCGATGTTAAAATAGGACAAAAGATAAAAAAAGGTGAACTTATAGGACTTAGTGGGGCTACA
GGTAGGGTAAGTGGGCCGCATTTGCATTTTGGAATTTTAGCTGGAGGCAAACAAGTTGATCCTTTGGATTTTGTATCCAA
ATTTAATGCTATTTTTCAATGA

Upstream 100 bases:

>100_bases
TTAATGCTGAAGATGAAAAACTTAAAAATAATCGCCAAGCTTTGGTTTATGAAATTTATGCGGAGTTTTTAAAAATCGCC
GATCTTAAAGAGTTAAGCTT

Downstream 100 bases:

>100_bases
AATTTAGTGACTTTTTCCATGCTTGGCTCCATGAAAGCTATTATAAAAATGCTGTAAGTATAGGAAAAAACGGAGATTTT
TTTACTGCTGTAAGCGTAGG

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNGKNIPTFTHPKNQEKVLAIFSLPYKNPPQNTKLIAFY
KDKKEEIFIKTLEGNYKSEKLQVENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
NEKVASYHSGTDFRAAIGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDVKIGQKIKKGELIGLSGAT
GRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ

Sequences:

>Translated_273_residues
MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNGKNIPTFTHPKNQEKVLAIFSLPYKNPPQNTKLIAFY
KDKKEEIFIKTLEGNYKSEKLQVENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
NEKVASYHSGTDFRAAIGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDVKIGQKIKKGELIGLSGAT
GRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ
>Mature_273_residues
MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNGKNIPTFTHPKNQEKVLAIFSLPYKNPPQNTKLIAFY
KDKKEEIFIKTLEGNYKSEKLQVENKKIFPPKTIQERITKELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTF
NEKVASYHSGTDFRAAIGTPIYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDVKIGQKIKKGELIGLSGAT
GRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=44.3478260869565, Blast_Score=91, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30620; Mature: 30620

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNGKNIPTFTHPKNQEKVL
CHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEE
AIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQVENKKIFPPKTIQERITK
EEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
ELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTFNEKVASYHSGTDFRAAIGTP
HHHHHHHHHHCCCCHHHHCCEECCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHCCC
IYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDVKIGQKIKKGELIGLSGAT
EEECCCCEEEEECCEEECCCEEEEECCCCHHHHHEEEEEEEHHHCCEECCCCEEEECCCC
GRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKALWLFLSLTLWLFGAQNLELIKGQALFLELDKKDFLSLKNNGKNIPTFTHPKNQEKVL
CHHHHHHHHHHHHHHCCCCEEEEECEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEE
AIFSLPYKNPPQNTKLIAFYKDKKEEIFIKTLEGNYKSEKLQVENKKIFPPKTIQERITK
EEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
ELKEANAIYSSYTPKALFNGAFNIPLNSFITSDFGKARTFNEKVASYHSGTDFRAAIGTP
HHHHHHHHHHCCCCHHHHCCEECCCHHHHHHCCCCCCHHHHHHHHHHCCCCCEEHHHCCC
IYAANSGVVKIAKDRYFAGNSVVIDHGFGIYSQYYHLSKIDVKIGQKIKKGELIGLSGAT
EEECCCCEEEEECCEEECCCEEEEECCCCHHHHHEEEEEEEHHHCCEECCCCEEEECCCC
GRVSGPHLHFGILAGGKQVDPLDFVSKFNAIFQ
CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]