| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237913
Identifier: 57237913
GI number: 57237913
Start: 1085312
End: 1085827
Strand: Reverse
Name: 57237913
Synonym: CJE1170
Alternate gene names: NA
Gene position: 1085827-1085312 (Counterclockwise)
Preceding gene: 57237914
Following gene: 57237912
Centisome position: 61.08
GC content: 36.43
Gene sequence:
>516_bases ATGAAAAAAATTTATTTTATGCTAGCAATAGCAGGAATTTTCGCTGGTTGTGTATCAAGTGCAAACAGTGCAACTAAAAA TTCAAGTGCAAATAGCACTGCCCCATCTCAAGATGTTATCGTGCAAAAAGTCGATAAAGATGATGTGCGTGATATTATCA GAGAAGAAAAAATGTTGGCTCCAGATGCTAGCGAAACGGAACTTAGTTTTACAGCAGTTGGTGAAGGGATTGCTCCGATG AATACAGTTTCTACTGCTCAAGCCCTAGCTTTAGCAAAAAGAGCAGCGATTACAGATGCTTACAGACAGCTTGCAAGTAA GCTTTATGGTGTGAAAGTGAATGGTAAAGACACCGTAAAAGATGCAATGCTTAGAAGTTCAACTATTACTGCGCAAGTAA ATGGTTTGATAAAAAATGCAAGTATTATTGATCAGAATTTTAATCAAGGGCTTTATAGGGTAAACTTAGAACTTAAAATC GATGCAGACAAGTGGAAAGAATTGTTTGCTTATTAA
Upstream 100 bases:
>100_bases GTTAAGCGATGAAAACTTTGGTTTAGATTTGTAATAAGTTTAAAGTTGGAACGCTTATTGCTTTTTATTTTACTAATTAC AATATTTTGAAGGTGTAAAA
Downstream 100 bases:
>100_bases TCTTTCTTAGCTTTAAGCTTTTTGCCCAAGATGAATTTATTTTTTGGGCAGAGCTTTCTAGTAAAAATTTCATTCTCTTT CATCAAAATCAAAATTTATC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKVDKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPM NTVSTAQALALAKRAAITDAYRQLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKI DADKWKELFAY
Sequences:
>Translated_171_residues MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKVDKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPM NTVSTAQALALAKRAAITDAYRQLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKI DADKWKELFAY >Mature_171_residues MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKVDKDDVRDIIREEKMLAPDASETELSFTAVGEGIAPM NTVSTAQALALAKRAAITDAYRQLASKLYGVKVNGKDTVKDAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKI DADKWKELFAY
Specific function: Unknown
COG id: COG3018
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18513; Mature: 18513
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKVDKDDVRDIIREEKMLA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC PDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYRQLASKLYGVKVNGKDTVK CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHH DAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKIDADKWKELFAY HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEEEEECHHHHHHHHCC >Mature Secondary Structure MKKIYFMLAIAGIFAGCVSSANSATKNSSANSTAPSQDVIVQKVDKDDVRDIIREEKMLA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCC PDASETELSFTAVGEGIAPMNTVSTAQALALAKRAAITDAYRQLASKLYGVKVNGKDTVK CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCHHHH DAMLRSSTITAQVNGLIKNASIIDQNFNQGLYRVNLELKIDADKWKELFAY HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEEEEEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA