| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237579
Identifier: 57237579
GI number: 57237579
Start: 516948
End: 518240
Strand: Direct
Name: 57237579
Synonym: CJE0577
Alternate gene names: NA
Gene position: 516948-518240 (Clockwise)
Preceding gene: 57237578
Following gene: 57237580
Centisome position: 29.08
GC content: 32.17
Gene sequence:
>1293_bases ATGAAATTAAAAATCGATTTTTCTTACACTCCGGCACAACTTAAAGTTTTTGATGATAAAAATCCACGCTTTATAACTGT AGCAAAGGGCAGAAGACTTGGTTTTACAAGGGGAAGTGCTAAGTTTGTTATCGAAAACTTGCTTTTAGGACAAAATGTTT TATGGGTGGATACCATACAAGCAAATTTACAAAATTATTACGAGTTATATTTTACACCTGAGTTAAAAAACTTGCCAAAA GATTTTTACTCATGGAGTGTGCAAGATAAGAAACTAATTATTAATGGAGCAGTGCTTCATATGAGAAGTGCTGAAAGAAG TGAAAATATCGAAGGTTTTGGATATGACCTTGTTATCTTAAACGAAGCAGGAATTATTTTAAAAGGTAGTAAAGGAGAGT ATCTTTGGTATAACGCTATAAGACCTATGTTGCTTGATAACCCTAAATCAAGAGCGATTATCGGTGGAGTTCCTAAAGGA AAAAATCTATTTTATGAACTTTGCAGAAAAGAACTCAGCGATAAAAATTGGAAACATTTTCAATTCTCAAGTTATGATAA TCCATTTTTAAAAGAAGAGCAAATTAAAGAATTAATTGAAGAAGTAGGCGGAGAAGGTAGTGAAGTTGTCAAGCAAGAAA TTTATGGCGAGTTTATAGATAGCTCGAGTGCTGAATTATTTTCTCTAAGTGAAATTGAAAATGCGATGAGCAAGAACTCT TTTAGTATTGAAAAAATGCAAGGCGAGAATATTTGGGGGCTTGATGTAGCAAGATATGGAGATGATAAGAGTGCTTTAGC AAAAAGAAAAGGTTTTGTAATTTATGAGATTAAAAAATACTCACAACTTGGAACTATAGAATTAGCAAACAAAATACTAG CCGAATACAATCAAAGCGAAGATAAACCAAAAGGTATTTTTATAGATACCTGTGGTCTTGGCGTTGGCGTATATGATGTC TTGTTAAATTATGGTTTGCCTGTATTTGAGGCAAATTCTGCAAATTCTGCAACCAGTAATGAATACTTAAATAAAAGAGC GCAAATGTATTTTACATTTACTAAAAACTTAAAACACATGGAGCTTGTTAAAGATGAAGAATTAAAAAAAGATATGAGAA TGATTGAATATGAATATAGCGACAAGGGGCTTTTAAAGATAGTTTCAAAAGAACAATTAAAAAAGAACTATGGCAAAAGT CCTGATGTTAGCGATGCGGTGGCATTAACTTTTTTTGAAAAACTATACAGCAGAAACAATACTAATGAAGATTGGAGTTA TGATGGCTGGTGA
Upstream 100 bases:
>100_bases TTAGTATGTTCTTGCTAAAAAATCAACATGGATATGTGGATAAACAAGAAGTTGTCAGCGATAACGTTCAAAAAATTGAA ATTATAAGAAGTGAAATCAA
Downstream 100 bases:
>100_bases GTTTTTAATGATCTATGATGCAATTGATGTAAACAAAATAAAAAAGCTTTCAAATTTAAGCGATGAGGCTATAAAGTCAA GTCTTGCAAATGAATTTTTA
Product: terminase B protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS PDVSDAVALTFFEKLYSRNNTNEDWSYDGW
Sequences:
>Translated_430_residues MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS PDVSDAVALTFFEKLYSRNNTNEDWSYDGW >Mature_430_residues MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQANLQNYYELYFTPELKNLPK DFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVILNEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKG KNLFYELCRKELSDKNWKHFQFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSEDKPKGIFIDTCGLGVGVYDV LLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHMELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKS PDVSDAVALTFFEKLYSRNNTNEDWSYDGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49416; Mature: 49416
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQ CEEEEEECCCCCEEEEEECCCCCEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEEHHHH ANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVIL HHHCCEEEEEECCCHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEE NEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKGKNLFYELCRKELSDKNWKHF ECCCEEEECCCCCEEEECCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEE QFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCC FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSE CEEEEECCCCEEEEEHEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC DKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHM CCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHH ELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKSPDVSDAVALTFFEKLYSRNN HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC TNEDWSYDGW CCCCCCCCCC >Mature Secondary Structure MKLKIDFSYTPAQLKVFDDKNPRFITVAKGRRLGFTRGSAKFVIENLLLGQNVLWVDTIQ CEEEEEECCCCCEEEEEECCCCCEEEEECCCEECCCCCCHHHHHHHHHHCCCEEEEHHHH ANLQNYYELYFTPELKNLPKDFYSWSVQDKKLIINGAVLHMRSAERSENIEGFGYDLVIL HHHCCEEEEEECCCHHHCCHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEEE NEAGIILKGSKGEYLWYNAIRPMLLDNPKSRAIIGGVPKGKNLFYELCRKELSDKNWKHF ECCCEEEECCCCCEEEECCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCEE QFSSYDNPFLKEEQIKELIEEVGGEGSEVVKQEIYGEFIDSSSAELFSLSEIENAMSKNS EECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCC FSIEKMQGENIWGLDVARYGDDKSALAKRKGFVIYEIKKYSQLGTIELANKILAEYNQSE CEEEEECCCCEEEEEHEECCCCHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC DKPKGIFIDTCGLGVGVYDVLLNYGLPVFEANSANSATSNEYLNKRAQMYFTFTKNLKHM CCCCCEEEEECCCCHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHEEEEEEECCCCHH ELVKDEELKKDMRMIEYEYSDKGLLKIVSKEQLKKNYGKSPDVSDAVALTFFEKLYSRNN HHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC TNEDWSYDGW CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA