| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237558
Identifier: 57237558
GI number: 57237558
Start: 505468
End: 506322
Strand: Reverse
Name: 57237558
Synonym: CJE0556
Alternate gene names: NA
Gene position: 506322-505468 (Counterclockwise)
Preceding gene: 57237559
Following gene: 57237557
Centisome position: 28.48
GC content: 29.47
Gene sequence:
>855_bases ATGAATTGCAGAATAATTAACTTAGAACAAGGTAGCCATGAATGGTTAAATTTTAGAAAAGGAAAAATAGGTGCATCGAT GGTAGCATCTTGCGTAGGTATCAAAGGTGCTTTTAATTCCAAAGAAGAAGCAAAAGATATCATCTTGGGACTTAAAGAAG TTTATCAAAATGAAGCTATGAAAAAAGGCAATAACTATGAAGCTTTGATTAGAGCTAGAGTTGAGTTTTTACATTCTGTG AGTATCACTCCTGTAGTTTTGCAAAGTCTAGAAAATGAAATGTTTATAGCAAGTTTAGATGGTATTGATGAAAATGGGGT TGTTTATGAGTTTAAATATTCGCAAGATGAGTATGATTTTATCAAAAGAAATAAAAAGCCAAGTGATAAATACTACGCTC AAGTGCAATTTCAACTCTATATCAGTGGTAAAGAAAAATGCATTTTTGTAGCCATGAATAAAGAAGAAGAGATTGTAGAG TGCGAAGTTTCAAAAGATGAAGCTTATCAAGAATGGTTGGTTAAAAATATAAAGCAATTTATATTAGATTATATCATAGA TCAAAAAAGTGAATATAAAGAGCTTGAAGATACTAAAGCAAAAAATCTAACGATTGAAATTATAAGGCTTGAAAACACGA TTAAACCTATTAAAGAAAAGCTAGAAAGTCTTAAAAAAGAACTCATAGCCTTAGCAAATGGAGAAAAAGCAAGATGTTTG GATATTACAATTTATCCGCAAAGTAGAACTACAATTGATTATAAGGGCTTTTTAGAGCAAAAAAATATTACTGTGCCTAA AGAGTTTTATAAAGAAAGTATTTCAATGTGTTTAAAAATCAAAAAAGGAGCATAA
Upstream 100 bases:
>100_bases CGAAATAAAGGTTATGAAATAGAAACAGTTAGAAACAAAGAAACGAGAAATACTTTTTATATTTTAAAAAGCACTCCAAA AATAAAAAAGGCAGGATAAA
Downstream 100 bases:
>100_bases AATGAGTAATGAAGTTGTATTAAAAGAAGAAAATAAATTAGAAATAAATTTTAATCCTTATGAGTTGGCTTTGGTAAAAG GTGATTTATCAAAACTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
Sequences:
>Translated_284_residues MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA >Mature_284_residues MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSV SITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVE CEVSKDEAYQEWLVKNIKQFILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32868; Mature: 32868
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAM CCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDF HCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCHHHH IKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQF HHCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH ILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL HHHHHHCCCHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA EEEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHEECCCC >Mature Secondary Structure MNCRIINLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEAKDIILGLKEVYQNEAM CCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGIDENGVVYEFKYSQDEYDF HCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCHHHH IKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQF HHCCCCCCCCEEEEEEEEEEEECCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH ILDYIIDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCL HHHHHHCCCHHHHHHHCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEE DITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA EEEEECCCCCEEEHHCCCCCCCCCCCHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA