| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is yvyE [H]
Identifier: 57237484
GI number: 57237484
Start: 429082
End: 429666
Strand: Reverse
Name: yvyE [H]
Synonym: CJE0478
Alternate gene names: 57237484
Gene position: 429666-429082 (Counterclockwise)
Preceding gene: 57237487
Following gene: 57237477
Centisome position: 24.17
GC content: 27.35
Gene sequence:
>585_bases ATGCAAACTATTGATCAAATTTTTCAAACACAAATCGATATTAAAAAATCTACTTTCTTATCTTTTCTTTGCCCTTTTAA AGATTTTAAATTTTTAATAGAAACACTAAAAAAAGAACATCCAAAAGCCGTTCATTTTGTCTATGCTTATCGTGTTTTAA ATGATTTTAATCAAATTGCAGAAGATAAAAGTGATGATGGAGAGCCTAAAGGAACTTCTGGAATGCCAACTTTAAATGTT CTAAGGGGCTATGATCTTATCAATGCGGCTTTAATCACTGTAAGATATTTTGGCGGTATAAAACTTGGTACAGGGGGACT TGTAAGAGCCTATAGTGATGCGGCAAATGCCGTGATCAATAATTCTTCTTTACTTTCATTTGAATTGAAAAAAAATATAA CCATTGCTATTGATTTAAAAAATTTAAATCGTTTTGAACATTTTTTAAAAACTTATTCTTTTAATTTCACAAAAGATTTT AAGGATTGCAAAGCTATATTACATATCAAATTAAATGAAAAAGAGGAGCAAGAATTTGAAATTTTTTGTAAAAATTTTGC ACCTTTTGAAATAGAGAAATTATAA
Upstream 100 bases:
>100_bases AAAATATCAATGCAAATCATACAAATATCAAATATCTTAAAAATTAACATCAAATTGATTTTAGTTTTTATAAGTATAAT TTTAAACAAAAAAGGCAAAA
Downstream 100 bases:
>100_bases ATTCTTGCAAGTAAATACAAAAGCTCCAAAATGGAGCTTTTGATTAAATTGCGTTCAATAAATCATTTAACAAAGTATTA TTCTTACTTTGTTCATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIAEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL
Sequences:
>Translated_194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIAEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL >Mature_194_residues MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIAEDKSDDGEPKGTSGMPTLNV LRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVINNSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDF KDCKAILHIKLNEKEEQEFEIFCKNFAPFEIEKL
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22327; Mature: 22327
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIA CCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVIN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHEEC NSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDFKDCKAILHIKLNEKEEQEFE CCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHH IFCKNFAPFEIEKL HHHCCCCCEEEECC >Mature Secondary Structure MQTIDQIFQTQIDIKKSTFLSFLCPFKDFKFLIETLKKEHPKAVHFVYAYRVLNDFNQIA CCHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EDKSDDGEPKGTSGMPTLNVLRGYDLINAALITVRYFGGIKLGTGGLVRAYSDAANAVIN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHEEC NSSLLSFELKKNITIAIDLKNLNRFEHFLKTYSFNFTKDFKDCKAILHIKLNEKEEQEFE CCCEEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCHHHHH IFCKNFAPFEIEKL HHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 3141378; 8313894 [H]