Definition Campylobacter jejuni RM1221, complete genome.
Accession NC_003912
Length 1,777,831

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The map label for this gene is hcpE [H]

Identifier: 57237468

GI number: 57237468

Start: 417781

End: 418485

Strand: Direct

Name: hcpE [H]

Synonym: CJE0462

Alternate gene names: 57237468

Gene position: 417781-418485 (Clockwise)

Preceding gene: 57237467

Following gene: 57237469

Centisome position: 23.5

GC content: 27.52

Gene sequence:

>705_bases
ATGAGAATATTTTTAGCTTTATTTTTATTTTTTAATTCATTACTTGCATTAAGTGAATTAGAAGAAGGTTTAAAATTTTA
TGAAGCAAATAAATTTGATAAAGCTTATGAAATTTTTAAAAGCCTTTGTGAAAAAGATATTTCTAAAGCTTGTTTTTCTT
TAGCTTTTATGTACGAAAGTGCTAAGGGTATGAGTAAGGATTTAAATCAAGCTTATAAATTTTATGATAAAGCTTGCAAA
TTAGGTTTAGCAAGTGCGTGTTCTAATATGGCTTTGCTTTTGCAAAATCAAGGTTATAAAAATGAAGCTCTTTTGGCTTT
TAATAAAGCTTGTACTTTAGGAGAATCGTTAAGTTGTAATAATATAGCTTTATTTTATGAAAAAGAAAAAGATGGACAAA
TGGCCTCAAGTTTTTATAAAAGATCTTGTGATTTAAAAAATGCAAGAGCTTGTTATCAATTAGGGTCTTTATATGATAAA
GGAGAGCTTGTTAAAGCAAGTGTAAAATCTGCCCTTGCTTTTTATTCTAAATCTTGCACTTTAGGTTTTGGTGAGTCTTG
TTATTTGTTAGGACGCTATAATCAACTAGAAAAACAAGATTTAACAAAGGCAAAAAGATATTTTGGTATGGCTTGTGATC
AAAAACATCAAGAAGCTTGTGCAGCTTATAAAGAACTTAATTCTAAAGATATAGAGCTTTATTAA

Upstream 100 bases:

>100_bases
TAATCCAAGAAAAAAGTAAATTTTTAGATCTTAAAAAAGCAGAACTTCGAAAAAGAAGAGTACAGATTTTAAATGTTAGA
GAAAGTATAAAGGAAGATTG

Downstream 100 bases:

>100_bases
AAGTTCTATTTTCATTACTTTCAAAGATATTCTTAAATAAAATTAAGAATAACACAAAATTTATCGCTTTTTAAAGTTAA
ATTTATATTAATAGGGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cysteine-rich protein E [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK
LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY

Sequences:

>Translated_234_residues
MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK
LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY
>Mature_234_residues
MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYESAKGMSKDLNQAYKFYDKACK
LGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDK
GELVKASVKSALAFYSKSCTLGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY

Specific function: May hydrolyze 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: =3.5.2.6 [H]

Molecular weight: Translated: 26490; Mature: 26490

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGMSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
NIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCT
CEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
LGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY
CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRIFLALFLFFNSLLALSELEEGLKFYEANKFDKAYEIFKSLCEKDISKACFSLAFMYES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGMSKDLNQAYKFYDKACKLGLASACSNMALLLQNQGYKNEALLAFNKACTLGESLSCN
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCC
NIALFYEKEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCT
CEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC
LGFGESCYLLGRYNQLEKQDLTKAKRYFGMACDQKHQEACAAYKELNSKDIELY
CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]