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The map label for this gene is frdC [H]

Identifier: 57237463

GI number: 57237463

Start: 410273

End: 411055

Strand: Direct

Name: frdC [H]

Synonym: CJE0457

Alternate gene names: 57237463

Gene position: 410273-411055 (Clockwise)

Preceding gene: 57237462

Following gene: 57237464

Centisome position: 23.08

GC content: 32.69

Gene sequence:

>783_bases
ATGCGTGAGCTTATCGAAGGTTATTTGGGTAAGAGCATTGAGGGCAAAAAAAGTAAAATGCCTGCGAAATTAGACTTTAT
CCAAAGCGCCTCAGGGCTTTTTTTAGGTCTTTTTATGTGGGTGCATATGCTTTTTGTTTCTACAATTTTAGTCAGTGAGG
ATTTTTTTAATTCTGTGGTACATTTTTTAGAATTAAAATTTGTTTACGATAATCCTGTTATGAGTTATCTTACTTCATTT
TTAGCCGCCTGTGTTTTAGTGGTTTTTTTCGTTCATGCTTTACTTGCAATGAGAAAATTTCCTATTAATTACCGTCAGTA
TCAAATACTAAGAACACACAGTAAAAAAATGAATCACAGCGATACTTCGTTATGGTGGGTTCAAGCTTTTACAGGTTTTA
TTATGTTTTTCTTAGGTTCTGCTCATCTTATTTTTATTGTAACCAATGCAGATAAAATCAGCGGCGATATGTCAGGAGAT
AGGGTTGTAAGTCATTTTATGTGGCTTTTTTATGCTGTTCTTTTAGTCTGTGTTGAACTTCATGGAAGTATAGGGCTTTA
TAGACTTTGTGTTAAATGGGGTTGGTTTGAAGGAAAAAATGTAAAAGAAAGTCGCAAAAAGCTTAAAACTGCTAAATGGA
TAATCAGTATTTTCTTCCTAGTTTTAGGTGTGTTAAGTCTTGCAGCATTTATAAAAATAGGTTATGAAAACTACCAAAAT
CAAACCCAAACTACTGCGATGATAAAAAACTACAATGGAGCAAATTATGAATATACAATATAG

Upstream 100 bases:

>100_bases
TTTGTATAAAGTTTAAAAAAGTAAATATTTAATCTATCTTAAAGACTTTTGTAATATAATGAAATGGATTTTTTTAATTT
CTTTTTACAAAGGAGTAAAG

Downstream 100 bases:

>100_bases
TGATGCTTTAGTAATAGGTGGAGGATTAGCAGGTCTTAGAGCGGCTATTGAAGTAGCAAAGAGTGGCCAAAGTGTAACAC
TTTTAAGTATTTGTCCAGTG

Product: fumarate reductase cytochrome b-556 subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHMLFVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSF
LAACVLVVFFVHALLAMRKFPINYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIFFLVLGVLSLAAFIKIGYENYQN
QTQTTAMIKNYNGANYEYTI

Sequences:

>Translated_260_residues
MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHMLFVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSF
LAACVLVVFFVHALLAMRKFPINYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIFFLVLGVLSLAAFIKIGYENYQN
QTQTTAMIKNYNGANYEYTI
>Mature_260_residues
MRELIEGYLGKSIEGKKSKMPAKLDFIQSASGLFLGLFMWVHMLFVSTILVSEDFFNSVVHFLELKFVYDNPVMSYLTSF
LAACVLVVFFVHALLAMRKFPINYRQYQILRTHSKKMNHSDTSLWWVQAFTGFIMFFLGSAHLIFIVTNADKISGDMSGD
RVVSHFMWLFYAVLLVCVELHGSIGLYRLCVKWGWFEGKNVKESRKKLKTAKWIISIFFLVLGVLSLAAFIKIGYENYQN
QTQTTAMIKNYNGANYEYTI

Specific function: The fumarate reductase enzyme complex is required for fumarate respiration using formate or sulfide as electron donor [H]

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004224
- InterPro:   IPR000701 [H]

Pfam domain/function: PF01127 Sdh_cyt [H]

EC number: NA

Molecular weight: Translated: 30029; Mature: 30029

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure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HHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2388563; 9492313; 14500908; 2244791; 10586875; 11248702; 11532445 [H]