Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 57237409

GI number: 57237409

Start: 361491

End: 361736

Strand: Reverse

Name: fdx [H]

Synonym: CJE0403

Alternate gene names: 57237409

Gene position: 361736-361491 (Counterclockwise)

Preceding gene: 57237410

Following gene: 57237408

Centisome position: 20.35

GC content: 33.33

Gene sequence:

>246_bases
ATGTCTCTTTTAATTACAAAAGACTGCGTATGTTGTGATGCTTGCAGAGAAGAATGTCCTGATGAAGCTATTTATGAAAA
TAGTCCAATTTATGTAATAGACCCTGATCTTTGTTCAGAGTGCGTTAATGATTTTTCAGAGCCTGCCTGTATTGTTGCTT
GCCCATATGAATGTATCATTCCTGATCCTGATAATGTAGAAACTATAGAAGAATTAAAACTCAAACATAGAGATAGAGAA
TTTTAA

Upstream 100 bases:

>100_bases
TTCGGTGCAAAAAATTTATCTTTATTTCTATTTTTATATTTTATTTAAGTTTGGTTATTGTATAAACTAAAATTATTTTT
TAAATTTTTGAAAGGTTATG

Downstream 100 bases:

>100_bases
TGGCAAAAAAAACAGCCGTTGTTGATCTTGGCTCAAACTCCATTAGAATGGTGATTTTTGAAAAAACTTCTAGATATGGT
TTTTATACAACTTGCGAATA

Product: ferredoxin, 4Fe-4S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDFSEPACIVACPYECIIPDPDNVETIEELKLKHRDRE
F

Sequences:

>Translated_81_residues
MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDFSEPACIVACPYECIIPDPDNVETIEELKLKHRDRE
F
>Mature_80_residues
SLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDFSEPACIVACPYECIIPDPDNVETIEELKLKHRDREF

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=85, Percent_Identity=44.7058823529412, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9234; Mature: 9103

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
13.6 %Cys+Met (Translated Protein)
12.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
12.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDFSEPACIVACPYECII
CCEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCEEEEECCCEEEC
PDPDNVETIEELKLKHRDREF
CCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLLITKDCVCCDACREECPDEAIYENSPIYVIDPDLCSECVNDFSEPACIVACPYECII
CEECCCCCHHHHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCEEEEECCCEEEC
PDPDNVETIEELKLKHRDREF
CCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]