| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237397
Identifier: 57237397
GI number: 57237397
Start: 351883
End: 352668
Strand: Reverse
Name: 57237397
Synonym: CJE0391
Alternate gene names: NA
Gene position: 352668-351883 (Counterclockwise)
Preceding gene: 57237399
Following gene: 57237396
Centisome position: 19.84
GC content: 31.3
Gene sequence:
>786_bases ATGGAAATCACAGATTTACCTTATCTAATCATAGGAATCATTTCAGGTATTGCTTCTGGACTTTTTGGCATTGGTGGAGG TATGATTATCGTTCCTTCTATGTTCGCACTTGGAGCAAGTGCTCACCATGCTATCGGAATTTCAGTATTACAAATGATTT TTGCAGCAGTTTTTGGCTCTTATATTAATTATAAGAAAAAAAATCTAAATCTTAAAGATGGTATTATGATAGGTTTTGGA GGGCTCATAGGGGCAAGCTTTAGCGGAATGCTTTTAAAAGCTTTAAGTGATGTAGCTCTTACTAGCGTATTTTTGGCGGT AAGTTGTATATTTTTTATCAAATATGCTTTTGGAATTAAAGAAAACATTGTGCAAAATCAAAGAAGCGTTTGTGTAAAGA ATATCATTTTATTTATTGCTGGAGCTTTTACTGGTATTTTTGCTATTTCTTTGGGAATTGGTGGCGGACTTTTAATTGCT CCGATTTTAGCTTATTTTTTAGGCTATGATAGTAAAAAAGTTGTTTCCTTATCCTTGTTTTTTGTTATTTTTGCTTCAGT CTCTGGTATTATATCTTTTTCAAATTCTGGAGTTATAGACTCTGAAGTTATTCATAAAGGAATACTAGTAGGTATAGCTT CTATGGTTGGAGTTTTTATAGGAATTAAAATCATAGAAAAAATGCATATTTCAGCTCATAGAAAAATTTTACTTTGCGTA TATGCCTTATCAATACTTGGAACCACCCACTCTTTGCTTAATAAGCTAAATTTTATAAATTTTTAA
Upstream 100 bases:
>100_bases AAAAAAATATTCTATTGTTATAAAAAACTAAGATAATACTTAGCTTAATAAGATAAAATTATTCCGTATTTGAAATATTT AGTATTTTTTAGGAAAAGCT
Downstream 100 bases:
>100_bases CTTGGATTTATCCAAGTTCTTTTAATATTATTATGCTAAAATCTTAAATTTATTTAATGTTTAGGAAAGACTATGAACGA TACCATAAAAATCATTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein OxaA; Integral Membrane Protein- Permeases
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFG GLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVCVKNIILFIAGAFTGIFAISLGIGGGLLIA PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGIKIIEKMHISAHRKILLCV YALSILGTTHSLLNKLNFINF
Sequences:
>Translated_261_residues MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFG GLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVCVKNIILFIAGAFTGIFAISLGIGGGLLIA PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGIKIIEKMHISAHRKILLCV YALSILGTTHSLLNKLNFINF >Mature_261_residues MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAIGISVLQMIFAAVFGSYINYKKKNLNLKDGIMIGFG GLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIKENIVQNQRSVCVKNIILFIAGAFTGIFAISLGIGGGLLIA PILAYFLGYDSKKVVSLSLFFVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGIKIIEKMHISAHRKILLCV YALSILGTTHSLLNKLNFINF
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27639; Mature: 27639
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAIGISVLQMIFAAVFGS CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIK HHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENIVQNQRSVCVKNIILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH FVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGIKIIEKMHISAHRKILLCV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALSILGTTHSLLNKLNFINF HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MEITDLPYLIIGIISGIASGLFGIGGGMIIVPSMFALGASAHHAIGISVLQMIFAAVFGS CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YINYKKKNLNLKDGIMIGFGGLIGASFSGMLLKALSDVALTSVFLAVSCIFFIKYAFGIK HHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENIVQNQRSVCVKNIILFIAGAFTGIFAISLGIGGGLLIAPILAYFLGYDSKKVVSLSLF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHH FVIFASVSGIISFSNSGVIDSEVIHKGILVGIASMVGVFIGIKIIEKMHISAHRKILLCV HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALSILGTTHSLLNKLNFINF HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA