| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is flhB [H]
Identifier: 57237386
GI number: 57237386
Start: 338931
End: 340019
Strand: Direct
Name: flhB [H]
Synonym: CJE0380
Alternate gene names: 57237386
Gene position: 338931-340019 (Clockwise)
Preceding gene: 57237385
Following gene: 57237390
Centisome position: 19.06
GC content: 32.97
Gene sequence:
>1089_bases ATGGCAGGCGAAGATCAAGAAAAAACAGAAGAACCCACGTCCAAAAAGATAGAAGATGCGCGTAAAGAAGGTAATGTTCC AAAGTCTCAAGATGCGGCAGCTATTGTAACTTTGATAATTGGAGTAACTATAACTTTATTTATGATGAGTTTTATGGGCG AGAGAATTGTAAATTTATATAGATACTATCAAAGTTTTATTGGTGTTGAATTTGATTTGCGTATTATTCAAGCCATTATG ATTAAAAGCATTTTTGAGGTTTTAATTATTCTTGCACCTATTGTTTTAAGTATTATGATTGCTGGGGTTTTGGGAAATAT TATGCAATTTGGTTTTATTTTTACAACTAAACCTATTATGCCAAATTTAGGAAAAATCAATCCTCTAAAAGGTTTAAAAA ACCTTTTTTCATTGAAAAAAATTGTTGAAAGTATAAAAATTATTTTAAAAGTGGGTATTGTTTTTACTATAGCTTTTATA GTTTTACTTAAATTTATGCAAGAGCTTCCAAGAGTTGAGCTTTATACTATGGTTGCACAGCTTACTTGGCTAAGAGACAG AGCTATTGTTTTAGCAGCTATTGTTATAGTTGCTTTTTTAATTATTGCTGTTTTAGATGTTTTTTTGGTGCGTTTTCAGT ATTTTAAAGGTTTGCGTATGAGCAAACAAGAAATAAAAGATGAGTATAAACAAATGGAAGGAGATCCTCAGGTTAAAGGT AGAATTCGTAGACTTCAAATGGAAGCTGCGCGTCGTCGTATGGTTCAAGATGTTGCAGGTGCGGATGTGGTGATCACAAA CCCAACGCATTATGCCGTAGCTATTCGTTATGATACAGGTAAAGAACAAGCCCCTAGGGTTGTTGCCAAAGGAGTGGATT TTCTCGCTCTTCGCATAAAACAAGTAGCCTATGAAAATAATGTTGTAGTTTATGAAAATCCTCCTTTAGCAAGAGAGCTT TATAAAGCTTGTGATGTTAATGATCTTATTCCTAGGGAAATGTTTAAAGCTGTAGCTGAGGTGCTAGGATTTGTTTATAA TACAAATAATAAGAGTCGTTTAGCTGGTCAAGTAAAAAAAGGAAACTAA
Upstream 100 bases:
>100_bases CTTTACGAGGCTTTTTCTTCATTTTTATTCTTTAATTGAAATTCATAAATTTTCTACTATAATTTTACACACATATTAAA ATTTTTATTTAGGCTAAAAT
Downstream 100 bases:
>100_bases AACTTTTAAGGTGCTTTAGTTCCTATTTTGTTAATAAGCTCAAGAACCGATTTTTGAGTACTTGTATCTGCTGTATCGAC TTTAAAATATATTTCTACTC
Product: flagellar biosynthesis protein FlhB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIM IKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVKG RIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLAREL YKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVKKGN
Sequences:
>Translated_362_residues MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIM IKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFI VLLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVKG RIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLAREL YKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVKKGN >Mature_361_residues AGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLYRYYQSFIGVEFDLRIIQAIMI KSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPIMPNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIV LLKFMQELPRVELYTMVAQLTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVKGR IRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIKQVAYENNVVVYENPPLARELY KACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVKKGN
Specific function: May be involved in the export of flagellum proteins [H]
COG id: COG1377
COG function: function code NU; Flagellar biosynthesis pathway, component FlhB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III secretion exporter family [H]
Homologues:
Organism=Escherichia coli, GI1788188, Length=362, Percent_Identity=37.5690607734807, Blast_Score=241, Evalue=6e-65,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006136 - InterPro: IPR006135 [H]
Pfam domain/function: PF01312 Bac_export_2 [H]
EC number: NA
Molecular weight: Translated: 40987; Mature: 40855
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLY CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPIM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLLKFMQELPRVELYTMVAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH RIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIK HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH QVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVKK HHHHCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC GN CC >Mature Secondary Structure AGEDQEKTEEPTSKKIEDARKEGNVPKSQDAAAIVTLIIGVTITLFMMSFMGERIVNLY CCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYYQSFIGVEFDLRIIQAIMIKSIFEVLIILAPIVLSIMIAGVLGNIMQFGFIFTTKPIM HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNLGKINPLKGLKNLFSLKKIVESIKIILKVGIVFTIAFIVLLKFMQELPRVELYTMVAQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LTWLRDRAIVLAAIVIVAFLIIAVLDVFLVRFQYFKGLRMSKQEIKDEYKQMEGDPQVKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH RIRRLQMEAARRRMVQDVAGADVVITNPTHYAVAIRYDTGKEQAPRVVAKGVDFLALRIK HHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH QVAYENNVVVYENPPLARELYKACDVNDLIPREMFKAVAEVLGFVYNTNNKSRLAGQVKK HHHHCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC GN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8299954; 9384377 [H]