| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is serC [H]
Identifier: 57237377
GI number: 57237377
Start: 333297
End: 334373
Strand: Direct
Name: serC [H]
Synonym: CJE0371
Alternate gene names: 57237377
Gene position: 333297-334373 (Clockwise)
Preceding gene: 57237376
Following gene: 57237378
Centisome position: 18.75
GC content: 31.29
Gene sequence:
>1077_bases ATGAGAAAAATCAATTTCAGTGCAGGGCCATCGACTTTACCTTTAGAAATTTTAGAGCAAGCTCAAAAAGAACTCTGTGA TTATCAGGGTAGGGGTTATTCTATAATGGAAATTTCTCACCGCACAAAAGTATTTGAAGAAGTGCATTTTGGAGCACAAG AGAAAGCTAAAAAACTTTACGGGTTAAATGATGATTATGAAGTATTATTTTTACAAGGTGGAGCAAGTTTACAATTTGCT ATGATTCCTATGAATTTGGCTTTAAATGGGATTTGTGAATATGCAAATACAGGAGTTTGGACAAAAAAAGCAATTAAAGA AGCACAAATTTTAGGTGTCAATGTTAAAACCGTAGCAAGTAGCGAGGAAAGTAATTTTAATCATATTCCTAGAGTGGAAT TTAGAGATAATGCTGATTATGCTTATATTTGTTCTAACAATACTATTTATGGCACTCAATATCAAAATTATCCTAAAACT AAAACTCCTTTGATTGTGGATGCATCGAGTGATTTTTTTTCTAGAAAAGTAGATTTTTCAAATATTGCTCTTTTTTATGG CGGAGTGCAAAAAAATGCTGGAATTTCGGGTTTAAGTTGTATTTTTATCCGTAAAGATATGTTAGAAAGATCTAAAAATA AACAAATTCCTAGTATGTTAAATTATTTGACTCATGCTGAGAATCAGTCCTTGTTTAATACGCCTCCAACCTTTGCCATT TATATGTTTATTCTTGAAATGGATTGGCTTTTAAATCAAGGCGGACTTGATAAAGTACATGAGAAAAATTCTCAAAAAGC TGCTATGCTTTATGAGTGTATTGATTTAAGTAATGGATTTTATAAAGGACATGCAGATAAAAAGGACAGATCTTTAATGA ATGTGAGTTTTAATATTGCTAAAAATAAAGATTTAGAGCCTCTTTTTGTAAAGGAAGCCGAAGAAGCTGGAATGATAGGA CTTAAAGGACATAGAATTTTAGGAGGAATTCGTGCAAGTATTTATAATGCGCTTAATTTGGATCAGGTAAAAACCTTGTG TGAATTTATGAAAGAATTTCAAGGAAAATATGCATGA
Upstream 100 bases:
>100_bases TGGTAAAATAGCAAATTTAGAAGATCTTAAGAGTGATGATATCGTTATTTTAAGTTCTCAAACTTCTCAAAAAGAAGCAA AAATTTTATAAGGATAGATT
Downstream 100 bases:
>100_bases TAAAGCGTTTTGATGAGTGCGATAGAATGTCGCAAATTATTGTTTTTGATAAATATTTTAAGACTGCAGGACAAGTGGCT TTTGAACCTAGCGGAGATAT
Product: phosphoserine aminotransferase
Products: NA
Alternate protein names: Phosphohydroxythreonine aminotransferase; PSAT [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFA MIPMNLALNGICEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKT KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAI YMFILEMDWLLNQGGLDKVHEKNSQKAAMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIG LKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA
Sequences:
>Translated_358_residues MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFA MIPMNLALNGICEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKT KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAI YMFILEMDWLLNQGGLDKVHEKNSQKAAMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIG LKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA >Mature_358_residues MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYGLNDDYEVLFLQGGASLQFA MIPMNLALNGICEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKT KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAI YMFILEMDWLLNQGGLDKVHEKNSQKAAMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIG LKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA
Specific function: Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine [H]
COG id: COG1932
COG function: function code HE; Phosphoserine aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily [H]
Homologues:
Organism=Homo sapiens, GI17402893, Length=360, Percent_Identity=38.8888888888889, Blast_Score=262, Evalue=3e-70, Organism=Homo sapiens, GI10863955, Length=357, Percent_Identity=33.6134453781513, Blast_Score=214, Evalue=1e-55, Organism=Escherichia coli, GI1787136, Length=359, Percent_Identity=41.5041782729805, Blast_Score=261, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17506897, Length=364, Percent_Identity=40.6593406593407, Blast_Score=268, Evalue=5e-72, Organism=Saccharomyces cerevisiae, GI6324758, Length=387, Percent_Identity=33.8501291989664, Blast_Score=221, Evalue=1e-58, Organism=Drosophila melanogaster, GI21356589, Length=359, Percent_Identity=38.7186629526462, Blast_Score=254, Evalue=6e-68,
Paralogues:
None
Copy number: 2500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR022278 - InterPro: IPR003248 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.52 [H]
Molecular weight: Translated: 40466; Mature: 40466
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY CCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHC GLNDDYEVLFLQGGASLQFAMIPMNLALNGICEYANTGVWTKKAIKEAQILGVNVKTVAS CCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHEEECEEEEEEC SEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKTKTPLIVDASSDFFSRKVDFS CCCCCCCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCC NIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAI EEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHH YMFILEMDWLLNQGGLDKVHEKNSQKAAMLYECIDLSNGFYKGHADKKDRSLMNVSFNIA HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEE KNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA CCCCCCCCEEECHHHCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY CCEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHC GLNDDYEVLFLQGGASLQFAMIPMNLALNGICEYANTGVWTKKAIKEAQILGVNVKTVAS CCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHEEECEEEEEEC SEESNFNHIPRVEFRDNADYAYICSNNTIYGTQYQNYPKTKTPLIVDASSDFFSRKVDFS CCCCCCCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCCCCEEEECCCCHHHCCCCCC NIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAI EEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHH YMFILEMDWLLNQGGLDKVHEKNSQKAAMLYECIDLSNGFYKGHADKKDRSLMNVSFNIA HHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCEEEEEEEEEE KNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGKYA CCCCCCCCEEECHHHCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA