| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is serB [C]
Identifier: 57237337
GI number: 57237337
Start: 296067
End: 296690
Strand: Reverse
Name: serB [C]
Synonym: CJE0330
Alternate gene names: 57237337
Gene position: 296690-296067 (Counterclockwise)
Preceding gene: 57237338
Following gene: 57237336
Centisome position: 16.69
GC content: 32.05
Gene sequence:
>624_bases ATGATTAAACTTTGTGTTTTTGACTTTGATGCTACTTTAATGGATGGTGAAACCATCGATATTTTAGCTACAGCGCATGG CAAGGGTAATCAAACAAGCGAAATTACCCGCCATGCTATGACTGGAGAACTTGATTTTTTCGAAAGTCTTCAAAAACGAG TAAGCTTTTTAAAAGGTATGTCTTATAAAAAAGTTTTAGAATTAAGTAGCACACTTCCACTAATGCGTGGAGCACATGAA CTTATCCAATATTTAAAATCTAAAAATATACAAATTGTTATTTTTAGCGGTGGTTTTCATGAAGGCATAAATCCTGCTAT GCAAAAACTTGGAATTAACCTCGGTTTTGCAAATTATCTGCATCATAAAAATGACATTTTAACAGGGCTAGTTGGTGGGG AAATGATGTTTTCAAATTCAAAAGGCTTAATGCTACAACGATTAAAAAGCTTTTTAAATTTGAAAACAGATGAAGTGATG TGTGTTGGCGATGGGGCAAATGATTTGGCAATGTTTAACGAAAGTGGATTAAAGATTGCATTTTGTGCTAAAGAAATTTT ACGTTCTCAAGCTGATATTTGCATAGATATAAAAGACTTAAAAGAAATAATAAAGGTAATATAA
Upstream 100 bases:
>100_bases CTTTAGTTAAAGACAAAGGTATGATTTATGGTATAGGAAAAAGAGATGAAAATATCTTAACTATACTCAAAGTAGAAGCT TTGCTTAAGCGCGAATTTTA
Downstream 100 bases:
>100_bases TGAAAAATTTTTCTCTTTGGTGTGATTTTATAGAAAATAGTTTTTTAGATAATGAATTTTTAAATTTATTATCACATGGA ATTAATGGCGCTACTTCAAA
Product: phosphoserine phosphatase SerB
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGELDFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHE LIQYLKSKNIQIVIFSGGFHEGINPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI
Sequences:
>Translated_207_residues MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGELDFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHE LIQYLKSKNIQIVIFSGGFHEGINPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI >Mature_207_residues MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGELDFFESLQKRVSFLKGMSYKKVLELSSTLPLMRGAHE LIQYLKSKNIQIVIFSGGFHEGINPAMQKLGINLGFANYLHHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVM CVGDGANDLAMFNESGLKIAFCAKEILRSQADICIDIKDLKEIIKVI
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=190, Percent_Identity=31.0526315789474, Blast_Score=71, Evalue=8e-13, Organism=Escherichia coli, GI1790849, Length=197, Percent_Identity=35.5329949238579, Blast_Score=110, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6321647, Length=207, Percent_Identity=33.8164251207729, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 23010; Mature: 23010
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGELDFFESLQKRVSFLKGM CEEEEEEECCCEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC SYKKVLELSSTLPLMRGAHELIQYLKSKNIQIVIFSGGFHEGINPAMQKLGINLGFANYL CHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCHHHHH HHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVMCVGDGANDLAMFNESGLKIA HCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCEEH FCAKEILRSQADICIDIKDLKEIIKVI HHHHHHHHCCCCEEEEHHHHHHHHHHC >Mature Secondary Structure MIKLCVFDFDATLMDGETIDILATAHGKGNQTSEITRHAMTGELDFFESLQKRVSFLKGM CEEEEEEECCCEEECCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC SYKKVLELSSTLPLMRGAHELIQYLKSKNIQIVIFSGGFHEGINPAMQKLGINLGFANYL CHHHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHCCCCCHHHHH HHKNDILTGLVGGEMMFSNSKGLMLQRLKSFLNLKTDEVMCVGDGANDLAMFNESGLKIA HCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCEEECCCCCEEH FCAKEILRSQADICIDIKDLKEIIKVI HHHHHHHHCCCCEEEEHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 11342136; 12051918 [H]