| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237121
Identifier: 57237121
GI number: 57237121
Start: 118239
End: 119186
Strand: Direct
Name: 57237121
Synonym: CJE0109
Alternate gene names: NA
Gene position: 118239-119186 (Clockwise)
Preceding gene: 57237120
Following gene: 57237122
Centisome position: 6.65
GC content: 26.27
Gene sequence:
>948_bases ATGAAAAAAATATTCACAGTAGCTCTTCTTGGAGCTACTTTACTTTATGCAGAAAGCTCAGCTTTTGGTGCAGGAGATAT AACAAGCAATTCTTCTTATGGTTTAACTTCAAATGAAAAATTATTTAAAGAAAAGTTAGATAATTTAAATAATGAAAATA TACAAACAAATGCTAGAATTAATGAAATTAACGAAAGAATCGAGGGTTTACAAAGCACTTTAGAAGGTATAAATTCTCAA TATGCTAAATCAAATTCTAGATTAAGTCAAGTTGAAGAGAATAATCAAAATATTGAAAATAATTTTACTAGTGAAATTCA AAAATTAAAGGCTTATGTTGAAGAAAGTAGAAAAATTCAAGAAGCTAATAATAAGCAAGTAAAAAAAGTTTTAGCCGAAC TTAGTTCTTTAGTAGATGCTATTAATGCAAATTATGTTTCTAAAAACGAATTAAATGATGCAAATTTAAGCGTTAAAACT ATTACACCTAGTGTTGTTGTTTCAACTACAGATTCAAATAGTACCATTGAAAACAATAATACTCAAAATACCCAAGATGA TAAAGCAAAACAAATTGATGAATCTTGGAAAAAGAAAAAAAATAATGAAATTTTAGAATTAGCGATAAAAGATGTTGATA AAAATGCTTTTGAAGATTCCAAAGCAAAATTAAATTTTCTCATAACAAAGCAGTATAAACCTGCAAGAGCAAATTTTTGG TTAGGGGAGATCGAGTATAAACAAAAAAATTATAACAATGCTATTGTTTATTATAAAAAAAGTTCTTCTTTGAGTACAAA AGGAGATTATTTCCCAAAACTTTTATATCATACTGCCATTTCATTGGATAAAACAGGTGATACAAAAACAGCAAATGGTT TTTATAAAGCTTTAAAAACTAATTATCCAAATTCACCCGAAGCAAAAGCTTCACCTAATAGAAAATAA
Upstream 100 bases:
>100_bases TGTTAAAAGCTATGGAGAAACAAATCCTGTGTGTACTGAAAAAACTAAAGCTTGCGATGCGCAAAACAGACGTGCTGAAT TTAAATTATCAAGATAATTA
Downstream 100 bases:
>100_bases ATTAAGGAGATAAAATGGCTATAGAAAAAAATAGTGTAGTTTCAATGTTTTATGAGTTAAAAGATGCAAATACAAATGAA GTTTTAGAATCAAATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Protein; Tpr Repeat-Containing Protein; TPR Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; ADP-Heptose-LPS Heptosyltransferase II; Tetratricopeptide TPR_2 Repeat-Containing Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEKLDNLNNENIQTNARINEINERIEGLQSTLEGINSQ YAKSNSRLSQVEENNQNIENNFTSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKLNFLITKQYKPARANFW LGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK
Sequences:
>Translated_315_residues MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEKLDNLNNENIQTNARINEINERIEGLQSTLEGINSQ YAKSNSRLSQVEENNQNIENNFTSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKLNFLITKQYKPARANFW LGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK >Mature_315_residues MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEKLDNLNNENIQTNARINEINERIEGLQSTLEGINSQ YAKSNSRLSQVEENNQNIENNFTSEIQKLKAYVEESRKIQEANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKT ITPSVVVSTTDSNSTIENNNTQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKLNFLITKQYKPARANFW LGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDKTGDTKTANGFYKALKTNYPNSPEAKASPNRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35418; Mature: 35418
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEKLDNLNNENIQTNARI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCHH NEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNFTSEIQKLKAYVEESRKIQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKTITPSVVVSTTDSNSTIENNN HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCC TQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKLNFLITKQYKPARANFW CCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHCCCCCCEEEEEEEECCCCCCCCEE LGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDKTGDTKTANGFYKALKT EEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC NYPNSPEAKASPNRK CCCCCCCCCCCCCCC >Mature Secondary Structure MKKIFTVALLGATLLYAESSAFGAGDITSNSSYGLTSNEKLFKEKLDNLNNENIQTNARI CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCHH NEINERIEGLQSTLEGINSQYAKSNSRLSQVEENNQNIENNFTSEIQKLKAYVEESRKIQ HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH EANNKQVKKVLAELSSLVDAINANYVSKNELNDANLSVKTITPSVVVSTTDSNSTIENNN HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCC TQNTQDDKAKQIDESWKKKKNNEILELAIKDVDKNAFEDSKAKLNFLITKQYKPARANFW CCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHCCCCCCEEEEEEEECCCCCCCCEE LGEIEYKQKNYNNAIVYYKKSSSLSTKGDYFPKLLYHTAISLDKTGDTKTANGFYKALKT EEEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC NYPNSPEAKASPNRK CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA