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The map label for this gene is ygeA [H]

Identifier: 57237092

GI number: 57237092

Start: 93301

End: 93996

Strand: Reverse

Name: ygeA [H]

Synonym: CJE0080

Alternate gene names: 57237092

Gene position: 93996-93301 (Counterclockwise)

Preceding gene: 57237093

Following gene: 57237087

Centisome position: 5.29

GC content: 26.01

Gene sequence:

>696_bases
ATGAAAACCATTGGTATTATAGGCGGAATGAGTTTTGAAAGCACTATTACTTATTATAAAACAATAAATCAAGCTATAAA
TGATAAATTAAAATCTTTAAATTCTGCAAAAATTTTACTTTACAGTGTTAATTTTGAAGAAATAGAAAATTTACAAAGCC
AAGATAAATGGCAAGAAGCTGCACAAATTTTGACTCAATGTGCTAAAAAATTAGAACTTGCAGGGGCTAATTTTATAATA
ATTGCAACTAATACTATGCATAAGGTTTTTGATGAAATTCAACAAAATATAAATATCCCTATTTTACATATTGCAAAAAG
TTCTGCTAAGGCTTTAAAACAAGAAAACATACAAAAAATTGGTTTATTGGGTACTAAATACACAATGACTCAGGATTTTT
ATAAAAAAATGCTGATTGAAGAAAATATTAGCGTTATTATTCCTAGCGATGAAGATATAAAAATCGTTAATGATATTATT
TTTAATGAGCTTTGTAAAGGTGAAATCAAGCAAGAATCTAAAGAAAAATATTTAAATATTATAAAAAAACTACAAGAAAA
AGGGGCAAAGGGAGTGCTTTTAGCTTGCACTGAAATTGGTTTATTAATATCCAAAAATGATACAAATATCAAAATTTTTG
ATACAAGTCTTATTCACGCCCTTGATGCTGCTAATGAAGCTTTAAAAGATTTATAA

Upstream 100 bases:

>100_bases
ATAAAAATATTAAAATATATTTATTTATTTAAAAATAAATCATATTTCTATGAAATATATTGTAATAAAACGACTCAAAA
ATTAATTCTTAAGGAGAAAA

Downstream 100 bases:

>100_bases
TTAAAAGATGCCCAAAAATGGGCAAATTGCAATATTTTGAAAAGATTTATACTTATATCGGTTTAAATCTTATCTTGCTT
TATAGTTTGCTATCTTTTTC

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEAAQILTQCAKKLELAGANFII
IATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDII
FNELCKGEIKQESKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL

Sequences:

>Translated_231_residues
MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEAAQILTQCAKKLELAGANFII
IATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDII
FNELCKGEIKQESKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL
>Mature_231_residues
MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEAAQILTQCAKKLELAGANFII
IATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQKIGLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDII
FNELCKGEIKQESKEKYLNIIKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=224, Percent_Identity=45.5357142857143, Blast_Score=227, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25967; Mature: 25967

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEA
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHH
AQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQKI
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
GLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYLNI
HCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL
HHHHHHCCCCCEEEEEEHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTIGIIGGMSFESTITYYKTINQAINDKLKSLNSAKILLYSVNFEEIENLQSQDKWQEA
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHH
AQILTQCAKKLELAGANFIIIATNTMHKVFDEIQQNINIPILHIAKSSAKALKQENIQKI
HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
GLLGTKYTMTQDFYKKMLIEENISVIIPSDEDIKIVNDIIFNELCKGEIKQESKEKYLNI
HCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKKLQEKGAKGVLLACTEIGLLISKNDTNIKIFDTSLIHALDAANEALKDL
HHHHHHCCCCCEEEEEEHCCEEEECCCCEEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]